Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 RNU6-1105P-201ENST00000384774 107 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 MIR653-201ENST00000385279 96 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 RNU6-1248P-201ENST00000391096 64 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 PIGPP3-201ENST00000425307 415 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 MTND5P22-201ENST00000458380 195 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 HMGN1P7-201ENST00000491722 313 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 CYCTP-201ENST00000504253 315 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 RNU6-1143P-201ENST00000516125 104 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 AL512310.8-201ENST00000550183 120 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 AC120024.3-201ENST00000603167 156 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 MIR502-201ENST00000606349 86 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.812-201ENST00000610788 101 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.784-201ENST00000613803 101 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.787-201ENST00000616522 101 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.780-201ENST00000617336 101 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.801-201ENST00000619005 101 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 AC134026.1-201ENST00000623249 2239 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 AP000648.3-201ENST00000623539 4507 ntBASIC1.39□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.84-201ENST00000363011 104 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 SNORA63-201ENST00000363450 132 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 RNU6-833P-201ENST00000363486 107 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 SNORA63C-201ENST00000364578 129 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.500-201ENST00000384466 111 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 RNU6-1160P-201ENST00000384546 104 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 RNU6-1109P-201ENST00000391187 107 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 RN7SKP101-201ENST00000411376 320 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 DYNLT3P2-201ENST00000442517 295 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 MTATP8P1-201ENST00000467115 207 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 RPL23AP54-201ENST00000495129 419 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 AC114811.1-201ENST00000507207 168 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 RNU2-31P-201ENST00000516954 155 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 RNU6-250P-201ENST00000516958 103 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 MIR3664-201ENST00000579074 99 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 MIR8081-201ENST00000611533 95 ntBASIC1.38□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.203-201ENST00000364106 102 ntBASIC1.37□□□□□ -2.19
CHMP1AQ9HD42 RNU6-326P-201ENST00000365480 107 ntBASIC1.37□□□□□ -2.19
CHMP1AQ9HD42 RNU6-163P-201ENST00000384396 106 ntBASIC1.37□□□□□ -2.19
CHMP1AQ9HD42 RNU6-763P-201ENST00000390865 106 ntBASIC1.37□□□□□ -2.19
CHMP1AQ9HD42 MLLT10P1-201ENST00000418346 262 ntBASIC1.37□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.720-201ENST00000517166 92 ntBASIC1.37□□□□□ -2.19
CHMP1AQ9HD42 CYP3A52P-201ENST00000563326 91 ntBASIC1.37□□□□□ -2.19
CHMP1AQ9HD42 AC006504.6-201ENST00000590142 199 ntBASIC1.37□□□□□ -2.19
CHMP1AQ9HD42 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.37□□□□□ -2.19
CHMP1AQ9HD42 AC027279.3-201ENST00000625055 122 ntBASIC1.37□□□□□ -2.19
CHMP1AQ9HD42 AC068700.1-201ENST00000565862 3754 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.512-201ENST00000384518 102 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 MIR606-201ENST00000384851 96 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 MIR526A1-201ENST00000384897 85 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 SNORD41-201ENST00000386967 70 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 MIR891A-201ENST00000401237 79 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 SNORA36B-201ENST00000410438 131 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 SNRPGP10-201ENST00000432323 225 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 U8.19-201ENST00000459095 133 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.637-201ENST00000459424 114 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 RNU6-922P-201ENST00000516753 99 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 AL513534.2-201ENST00000603836 250 ntBASIC1.36□□□□□ -2.19
CHMP1AQ9HD42 SNORA2.2-201ENST00000365473 135 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 RNU6-969P-201ENST00000383900 105 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 MTCO2P33-201ENST00000402100 465 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 RNU6-1203P-201ENST00000410703 110 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 AC091959.1-201ENST00000495857 238 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 RNU6-165P-201ENST00000517170 99 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 AC090049.2-201ENST00000550377 109 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 AL442663.2-201ENST00000554385 511 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 AC008269.2-201ENST00000561915 1105 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 AC005357.1-201ENST00000588399 301 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
CHMP1AQ9HD42 SNORD114-1-201ENST00000362705 72 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.111-201ENST00000363248 100 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 RNU6-1209P-201ENST00000363655 107 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.796-201ENST00000364268 102 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 Y_RNA.799-201ENST00000364992 102 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 SNORD50B-201ENST00000364995 70 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 SNORA70B-201ENST00000384210 135 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 SNORA53-201ENST00000391141 249 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 MIR1278-201ENST00000408753 81 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 SNORD45.4-201ENST00000516629 73 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 RNU6-570P-201ENST00000517051 105 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 AL512605.2-201ENST00000592972 256 ntBASIC1.34□□□□□ -2.19
CHMP1AQ9HD42 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CHMP1AQ9HD42 SNORA25.1-201ENST00000362326 128 ntBASIC1.33□□□□□ -2.2
CHMP1AQ9HD42 RNU6-662P-201ENST00000384253 104 ntBASIC1.33□□□□□ -2.2
CHMP1AQ9HD42 RNU6-131P-201ENST00000391144 107 ntBASIC1.33□□□□□ -2.2
CHMP1AQ9HD42 MIR548F4-201ENST00000408515 105 ntBASIC1.33□□□□□ -2.2
CHMP1AQ9HD42 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
CHMP1AQ9HD42 RNU6-437P-201ENST00000459408 95 ntBASIC1.33□□□□□ -2.2
CHMP1AQ9HD42 RPL30P7-201ENST00000479312 323 ntBASIC1.33□□□□□ -2.2
CHMP1AQ9HD42 RNU6-1338P-201ENST00000516328 91 ntBASIC1.33□□□□□ -2.2
CHMP1AQ9HD42 SNORA25.15-201ENST00000516487 89 ntBASIC1.33□□□□□ -2.2
CHMP1AQ9HD42 RNU6-635P-201ENST00000516651 102 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms