Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SNORD58C-201ENST00000365223 64 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 MIR29B2-201ENST00000385055 81 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 AC003685.2-201ENST00000422795 395 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 RNU6-221P-201ENST00000459541 99 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 RNA5SP148-201ENST00000516527 94 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 Y_RNA.690-201ENST00000516603 95 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 AC105245.1-201ENST00000581934 244 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 ZNF861P-201ENST00000588126 639 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 U4atac.1-201ENST00000618345 95 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 AL121890.5-201ENST00000620848 304 ntBASIC2.71□□□□□ -1.98
CD248Q9HCU0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CD248Q9HCU0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CD248Q9HCU0 RNU6-647P-201ENST00000364243 107 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 AL603914.1-201ENST00000401964 204 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 RNU2-70P-201ENST00000410718 179 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 RNU6-57P-201ENST00000411348 103 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 AC097463.2-201ENST00000421074 142 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.7□□□□□ -1.98
CD248Q9HCU0 EIF4EP4-201ENST00000424916 578 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.7□□□□□ -1.98
CD248Q9HCU0 Y_RNA.651-201ENST00000459380 103 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.7□□□□□ -1.98
CD248Q9HCU0 MIR449C-201ENST00000516047 92 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 RNA5SP153-201ENST00000516498 76 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.7□□□□□ -1.98
CD248Q9HCU0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 AC090517.3-201ENST00000625170 141 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.7□□□□□ -1.98
CD248Q9HCU0 AC008555.8-201ENST00000623602 2168 ntBASIC2.7□□□□□ -1.98
CD248Q9HCU0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD248Q9HCU0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CD248Q9HCU0 SNORA6-201ENST00000384033 151 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 RNU6-975P-201ENST00000384296 105 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 MIR218-1-201ENST00000384999 110 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 MIR1294-201ENST00000408503 142 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 RNA5SP511-201ENST00000410487 115 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 Y_RNA.617-201ENST00000410920 90 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.69□□□□□ -1.98
CD248Q9HCU0 AC023449.1-201ENST00000454464 154 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 AC010531.2-201ENST00000465012 153 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 AC096725.1-201ENST00000514266 313 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 Y_RNA.694-201ENST00000516677 117 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 AC121758.2-201ENST00000553271 193 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 AC024614.2-201ENST00000577584 372 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 MIR4435-1-201ENST00000582552 80 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.69□□□□□ -1.98
CD248Q9HCU0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.69□□□□□ -1.98
CD248Q9HCU0 Y_RNA.634-201ENST00000364811 113 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 SNORA72-201ENST00000384339 132 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 SNORA80E-201ENST00000384744 137 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 RPL30P4-201ENST00000429309 333 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 Z98742.2-201ENST00000431564 187 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 AC016717.1-201ENST00000448918 286 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 RPS26P45-201ENST00000471748 340 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 PRELID2P1-201ENST00000552837 301 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 AC015720.1-201ENST00000565251 277 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 AC091178.2-201ENST00000584401 117 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 uc_338.4-201ENST00000616635 176 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 AL590808.1-201ENST00000618696 141 ntBASIC2.68□□□□□ -1.98
CD248Q9HCU0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.68□□□□□ -1.98
CD248Q9HCU0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.68□□□□□ -1.98
CD248Q9HCU0 AC007336.1-201ENST00000576365 3828 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CD248Q9HCU0 Y_RNA.91-201ENST00000363042 107 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 RNU6-1164P-201ENST00000364428 107 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 RNU6-309P-201ENST00000364573 106 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 RNU6-880P-201ENST00000384526 107 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 SNORD77.4-201ENST00000516158 81 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 RNU2-60P-201ENST00000517290 128 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 RPL23AP91-201ENST00000569211 455 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 MIR2681-201ENST00000581814 105 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 AL929325.1-201ENST00000603096 117 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 MIR6895-201ENST00000613497 78 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 AC006435.5-201ENST00000624486 112 ntBASIC2.67□□□□□ -1.98
CD248Q9HCU0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.67□□□□□ -1.98
CD248Q9HCU0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CD248Q9HCU0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CD248Q9HCU0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CD248Q9HCU0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CD248Q9HCU0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
CD248Q9HCU0 Y_RNA.346-201ENST00000365385 112 ntBASIC2.66□□□□□ -1.98
CD248Q9HCU0 MIR548A1-201ENST00000385041 97 ntBASIC2.66□□□□□ -1.98
CD248Q9HCU0 SNORA26-201ENST00000391286 122 ntBASIC2.66□□□□□ -1.98
CD248Q9HCU0 Y_RNA.649-201ENST00000459077 103 ntBASIC2.66□□□□□ -1.98
CD248Q9HCU0 RN7SKP19-201ENST00000516016 252 ntBASIC2.66□□□□□ -1.98
CD248Q9HCU0 RNU6-781P-201ENST00000516377 101 ntBASIC2.66□□□□□ -1.98
CD248Q9HCU0 SNORA18.4-201ENST00000516440 124 ntBASIC2.66□□□□□ -1.98
CD248Q9HCU0 AC078899.2-201ENST00000595282 212 ntBASIC2.66□□□□□ -1.98
CD248Q9HCU0 AC097639.2-201ENST00000603159 172 ntBASIC2.66□□□□□ -1.98
CD248Q9HCU0 SNORD14A-201ENST00000606526 91 ntBASIC2.66□□□□□ -1.98
CD248Q9HCU0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CD248Q9HCU0 RNU6-508P-201ENST00000363231 103 ntBASIC2.65□□□□□ -1.99
CD248Q9HCU0 Y_RNA.203-201ENST00000364106 102 ntBASIC2.65□□□□□ -1.99
CD248Q9HCU0 RNU6-234P-201ENST00000365229 104 ntBASIC2.65□□□□□ -1.99
CD248Q9HCU0 RNU6-117P-201ENST00000365415 107 ntBASIC2.65□□□□□ -1.99
CD248Q9HCU0 RNU6-32P-201ENST00000383948 107 ntBASIC2.65□□□□□ -1.99
CD248Q9HCU0 RNU6-13P-201ENST00000384248 107 ntBASIC2.65□□□□□ -1.99
CD248Q9HCU0 Y_RNA.495-201ENST00000384435 112 ntBASIC2.65□□□□□ -1.99
CD248Q9HCU0 RNU6-12P-201ENST00000384604 107 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms