Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ATP5J2P3-201ENST00000451550 258 ntBASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 NDUFA4P2-201ENST00000489989 244 ntBASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 RN7SL636P-201ENST00000497504 294 ntBASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 ZNF271P-202ENST00000465539 1970 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 SNORD114-6-201ENST00000364393 72 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 Y_RNA.253-201ENST00000364562 112 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 RNU6-1072P-201ENST00000384703 107 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 RNU6-443P-201ENST00000384780 107 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 MIR515-2-201ENST00000384883 83 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 MIR515-1-201ENST00000384884 83 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 AL603914.1-201ENST00000401964 204 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 SNORA3.2-201ENST00000408221 125 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 RNA5SP127-201ENST00000411051 133 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 MLLT10P1-201ENST00000418346 262 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 RN7SL633P-201ENST00000488974 297 ntBASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZFYVE28Q9HCC9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 Y_RNA.525-201ENST00000384570 113 ntBASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 MIR624-201ENST00000385217 97 ntBASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 SNORA12.1-201ENST00000390873 148 ntBASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 AL445687.1-201ENST00000439946 251 ntBASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 RNU7-94P-201ENST00000459576 63 ntBASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 Y_RNA.690-201ENST00000516603 95 ntBASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 RNU1-104P-201ENST00000517280 175 ntBASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 U4atac.1-201ENST00000618345 95 ntBASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 U6.108-201ENST00000637764 58 ntBASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZFYVE28Q9HCC9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 MIR126-201ENST00000362291 85 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 Y_RNA.66-201ENST00000362862 102 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 Y_RNA.114-201ENST00000363265 113 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 SNORA8-201ENST00000384574 139 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 SNORA26.7-201ENST00000391288 122 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 RN7SKP192-201ENST00000411291 327 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 AL158823.1-201ENST00000418441 478 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 MRPS17P9-201ENST00000511924 393 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 RNA5SP385-201ENST00000515947 110 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 AC024995.1-201ENST00000523014 93 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 AC133485.4-201ENST00000561835 220 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 AC138907.4-201ENST00000570107 226 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 AL365205.2-201ENST00000594586 68 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 CTSLP2-204ENST00000629029 392 ntBASIC3.16□□□□□ -1.9
ZFYVE28Q9HCC9 AC008264.2-201ENST00000610193 3731 ntBASIC3.15□□□□□ -1.9
ZFYVE28Q9HCC9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZFYVE28Q9HCC9 RNU6-476P-201ENST00000384726 107 ntBASIC3.15□□□□□ -1.91
ZFYVE28Q9HCC9 RNU5E-3P-201ENST00000515913 68 ntBASIC3.15□□□□□ -1.91
ZFYVE28Q9HCC9 SNORA31.26-201ENST00000517250 137 ntBASIC3.15□□□□□ -1.91
ZFYVE28Q9HCC9 AC007536.1-201ENST00000533382 349 ntBASIC3.15□□□□□ -1.91
ZFYVE28Q9HCC9 AC087685.1-201ENST00000587507 141 ntBASIC3.15□□□□□ -1.91
ZFYVE28Q9HCC9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.15□□□□□ -1.91
ZFYVE28Q9HCC9 MIR3914-2-201ENST00000637339 95 ntBASIC3.15□□□□□ -1.91
ZFYVE28Q9HCC9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.15□□□□□ -1.91
ZFYVE28Q9HCC9 AL117342.1-201ENST00000404861 406 ntBASIC3.14□□□□□ -1.91
ZFYVE28Q9HCC9 MIR1262-201ENST00000408276 93 ntBASIC3.14□□□□□ -1.91
ZFYVE28Q9HCC9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.14□□□□□ -1.91
ZFYVE28Q9HCC9 MTATP6P21-201ENST00000440681 189 ntBASIC3.14□□□□□ -1.91
ZFYVE28Q9HCC9 AL049830.1-201ENST00000468034 425 ntBASIC3.14□□□□□ -1.91
ZFYVE28Q9HCC9 RNU6-772P-201ENST00000516042 105 ntBASIC3.14□□□□□ -1.91
ZFYVE28Q9HCC9 AC007751.1-201ENST00000529260 376 ntBASIC3.14□□□□□ -1.91
ZFYVE28Q9HCC9 AP002004.2-201ENST00000531656 154 ntBASIC3.14□□□□□ -1.91
ZFYVE28Q9HCC9 AC008507.4-201ENST00000585464 127 ntBASIC3.14□□□□□ -1.91
ZFYVE28Q9HCC9 U6.95-201ENST00000636931 70 ntBASIC3.14□□□□□ -1.91
ZFYVE28Q9HCC9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 RNU6-647P-201ENST00000364243 107 ntBASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 Y_RNA.280-201ENST00000364765 112 ntBASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 RNU6-1144P-201ENST00000384247 104 ntBASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 MIR627-201ENST00000384979 97 ntBASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 CST2P1-201ENST00000425770 87 ntBASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 Z96811.1-201ENST00000445880 108 ntBASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 RNU6-1061P-201ENST00000516530 99 ntBASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 AP006437.1-201ENST00000641440 3685 ntBASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 AL391516.1-201ENST00000554380 2449 ntBASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.13□□□□□ -1.91
ZFYVE28Q9HCC9 AC093831.2-201ENST00000624393 3427 ntBASIC3.12□□□□□ -1.91
ZFYVE28Q9HCC9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ZFYVE28Q9HCC9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ZFYVE28Q9HCC9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ZFYVE28Q9HCC9 Y_RNA.52-201ENST00000362760 96 ntBASIC3.12□□□□□ -1.91
ZFYVE28Q9HCC9 RNU6-309P-201ENST00000364573 106 ntBASIC3.12□□□□□ -1.91
ZFYVE28Q9HCC9 SNORD24-201ENST00000383884 75 ntBASIC3.12□□□□□ -1.91
ZFYVE28Q9HCC9 MIR512-1-201ENST00000384913 84 ntBASIC3.12□□□□□ -1.91
ZFYVE28Q9HCC9 MIR891A-201ENST00000401237 79 ntBASIC3.12□□□□□ -1.91
ZFYVE28Q9HCC9 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms