Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.19□□□□□ -2.06
EBF3Q9H4W6 ATP5EP1-201ENST00000510257 156 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 RNU7-115P-201ENST00000516433 55 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 RNU6-1337P-201ENST00000516525 95 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 AC112693.2-201ENST00000556538 232 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 AC068647.2-201ENST00000637380 353 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
EBF3Q9H4W6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
EBF3Q9H4W6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
EBF3Q9H4W6 SNORD31B-201ENST00000364977 69 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 RNA5SP138-201ENST00000365098 114 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 Y_RNA.337-201ENST00000365312 102 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 RNU6-546P-201ENST00000383991 107 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 SNORD14D-201ENST00000384390 87 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 Y_RNA.525-201ENST00000384570 113 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 RNU6-482P-201ENST00000391068 107 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 MIR513C-201ENST00000401352 84 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 MIR1283-1-201ENST00000408494 87 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 RNU2-63P-201ENST00000410792 194 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 AL445646.1-201ENST00000431784 216 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 AC074290.1-201ENST00000448883 135 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 RNU7-14P-201ENST00000459331 62 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 RPL23AP42-201ENST00000471152 471 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 MIR4724-201ENST00000579485 89 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 MIR5694-201ENST00000581190 76 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 MIR548AY-201ENST00000617669 107 ntBASIC2.18□□□□□ -2.06
EBF3Q9H4W6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
EBF3Q9H4W6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
EBF3Q9H4W6 SNORA27.1-201ENST00000362604 124 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 Y_RNA.251-201ENST00000364551 99 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 RNU6-44P-201ENST00000384045 107 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 MIR873-201ENST00000401120 77 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 SNORA36B-201ENST00000410438 131 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 RNU2-32P-201ENST00000411193 191 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 HSPE1P21-201ENST00000438283 308 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 AC016717.1-201ENST00000448918 286 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 RNU7-26P-201ENST00000458980 63 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 SNORD65B-201ENST00000459126 73 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 RNU7-57P-201ENST00000459540 60 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 CKS1BP2-201ENST00000497342 240 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.17□□□□□ -2.06
EBF3Q9H4W6 RNU6-63P-201ENST00000516690 95 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 MIR4658-201ENST00000584344 65 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 MIR4448-201ENST00000584360 86 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
EBF3Q9H4W6 AC009487.4-201ENST00000624969 3585 ntBASIC2.17□□□□□ -2.06
EBF3Q9H4W6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
EBF3Q9H4W6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
EBF3Q9H4W6 RNU6-199P-201ENST00000362954 107 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 RNU1-23P-201ENST00000363361 144 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 RNU6-1336P-201ENST00000383886 109 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 RNU6-376P-201ENST00000384731 106 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 RNU6-1228P-201ENST00000391014 107 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 RNU6-588P-201ENST00000410281 105 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 HMGN2P23-201ENST00000456759 269 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 AC016925.1-201ENST00000458303 298 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 SNORA70.12-201ENST00000516084 153 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 Y_RNA.686-201ENST00000516548 134 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 RNU6-548P-201ENST00000517083 115 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 MIR5688-201ENST00000580619 83 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 AP003357.1-201ENST00000604497 148 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 AL353997.5-201ENST00000618886 171 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 MIR1248-201ENST00000629190 106 ntBASIC2.16□□□□□ -2.06
EBF3Q9H4W6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
EBF3Q9H4W6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
EBF3Q9H4W6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
EBF3Q9H4W6 MIR367-201ENST00000362299 68 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 SNORD114-7-201ENST00000362520 77 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 RNU6-1082P-201ENST00000364574 107 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 Y_RNA.273-201ENST00000364703 102 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 RNU6-144P-201ENST00000383951 107 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 MIR561-201ENST00000385216 97 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 RNU2-48P-201ENST00000410694 191 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 Y_RNA.622-201ENST00000411091 108 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 AC016909.1-201ENST00000415916 166 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 SNRPGP8-201ENST00000454064 226 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 RPS26P55-201ENST00000471178 356 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 RNU6-295P-201ENST00000516901 104 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 AC027419.1-201ENST00000522976 328 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.15□□□□□ -2.07
EBF3Q9H4W6 AC127455.1-201ENST00000565496 145 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 MIR4753-201ENST00000585119 83 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 AL031274.2-201ENST00000599419 203 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 U2.20-201ENST00000613956 192 ntBASIC2.15□□□□□ -2.07
EBF3Q9H4W6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
EBF3Q9H4W6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.14□□□□□ -2.07
EBF3Q9H4W6 AL159152.1-201ENST00000635019 2587 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
EBF3Q9H4W6 SNORD45.3-201ENST00000363836 72 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 RNU6-975P-201ENST00000384296 105 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 U8.13-201ENST00000390842 128 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 SNORD37.2-201ENST00000391075 66 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 AL512604.1-201ENST00000404812 257 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 RNU4-43P-201ENST00000410628 137 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 AL035461.1-201ENST00000421490 332 ntBASIC2.14□□□□□ -2.07
EBF3Q9H4W6 HMGN2P18-201ENST00000450680 270 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms