Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MIR449C-201ENST00000516047 92 ntBASIC2.67□□□□□ -1.98
VPS11Q9H270 SNORD77.4-201ENST00000516158 81 ntBASIC2.67□□□□□ -1.98
VPS11Q9H270 RNA5SP367-201ENST00000516557 118 ntBASIC2.67□□□□□ -1.98
VPS11Q9H270 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.67□□□□□ -1.98
VPS11Q9H270 AL929325.1-201ENST00000603096 117 ntBASIC2.67□□□□□ -1.98
VPS11Q9H270 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.67□□□□□ -1.98
VPS11Q9H270 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VPS11Q9H270 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS11Q9H270 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VPS11Q9H270 AL159152.1-201ENST00000635019 2587 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 RNU6-766P-201ENST00000362478 107 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 RNU1-91P-201ENST00000364746 163 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 SNORA67.1-201ENST00000364749 141 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 CALM2P4-201ENST00000430810 426 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.66□□□□□ -1.98
VPS11Q9H270 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.66□□□□□ -1.98
VPS11Q9H270 SNORD65B-201ENST00000459126 73 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 RNA5SP153-201ENST00000516498 76 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 RNU6-1098P-201ENST00000516772 96 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 RNU7-116P-201ENST00000516940 62 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 AC015720.1-201ENST00000565251 277 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 MIR3126-201ENST00000577443 74 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 AC005000.2-201ENST00000605468 310 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 AC009831.4-201ENST00000620744 325 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS11Q9H270 AL365361.1-201ENST00000566942 3481 ntBASIC2.66□□□□□ -1.98
VPS11Q9H270 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS11Q9H270 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VPS11Q9H270 Y_RNA.85-201ENST00000363014 111 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 RNU6-117P-201ENST00000365415 107 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 MIR488-201ENST00000365739 83 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 SNORD14D-201ENST00000384390 87 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 AL138827.1-201ENST00000402666 306 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 RNA5SP511-201ENST00000410487 115 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 Z92545.1-201ENST00000411782 234 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 SRIP3-201ENST00000413200 219 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 AL139132.1-201ENST00000431587 344 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 RPS12P2-201ENST00000439728 269 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 RNA5SP236-201ENST00000516169 116 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 RNU5F-4P-201ENST00000516581 114 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 AC007751.1-201ENST00000529260 376 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 AC026271.5-201ENST00000577873 130 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 MIR5092-201ENST00000583139 88 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS11Q9H270 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.65□□□□□ -1.99
VPS11Q9H270 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VPS11Q9H270 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS11Q9H270 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VPS11Q9H270 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VPS11Q9H270 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS11Q9H270 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS11Q9H270 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VPS11Q9H270 RNU1-112P-201ENST00000364401 164 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 SNORD18B-201ENST00000365659 72 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 RNU6-1080P-201ENST00000383982 107 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 RNU6-756P-201ENST00000383997 107 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VPS11Q9H270 RNU6-1275P-201ENST00000391087 107 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 MIR1263-201ENST00000408324 86 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 EDDM3CP-201ENST00000415977 425 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 AC245102.2-201ENST00000448956 180 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 SNORD11-201ENST00000459124 84 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 AC010531.2-201ENST00000465012 153 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS11Q9H270 AC027419.1-201ENST00000522976 328 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 MIR4325-201ENST00000583049 90 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 AC062037.1-201ENST00000605302 128 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 SNORD14A-201ENST00000606526 91 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS11Q9H270 uc_338.4-201ENST00000616635 176 ntBASIC2.64□□□□□ -1.99
VPS11Q9H270 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS11Q9H270 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS11Q9H270 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VPS11Q9H270 Y_RNA.66-201ENST00000362862 102 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 Y_RNA.163-201ENST00000363702 113 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 RNU6-743P-201ENST00000364151 106 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 MIR624-201ENST00000385217 97 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 SNORD12C-201ENST00000386307 89 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 RNU2-70P-201ENST00000410718 179 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 AC087499.2-201ENST00000432861 149 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 AL021397.1-201ENST00000451806 248 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 RNA5SP20-201ENST00000515976 84 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 RNA5SP137-201ENST00000516833 135 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 AC007012.1-201ENST00000567192 175 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 AL035470.1-201ENST00000622571 220 ntBASIC2.63□□□□□ -1.99
VPS11Q9H270 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS11Q9H270 Y_RNA.528-201ENST00000384575 108 ntBASIC2.62□□□□□ -1.99
VPS11Q9H270 Y_RNA.558-201ENST00000384685 113 ntBASIC2.62□□□□□ -1.99
VPS11Q9H270 RNU7-14P-201ENST00000459331 62 ntBASIC2.62□□□□□ -1.99
VPS11Q9H270 RNU7-57P-201ENST00000459540 60 ntBASIC2.62□□□□□ -1.99
VPS11Q9H270 AC010598.1-201ENST00000510378 103 ntBASIC2.62□□□□□ -1.99
VPS11Q9H270 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS11Q9H270 RNA5SP490-201ENST00000517141 136 ntBASIC2.62□□□□□ -1.99
VPS11Q9H270 RPL23AP91-201ENST00000569211 455 ntBASIC2.62□□□□□ -1.99
VPS11Q9H270 AL365205.2-201ENST00000594586 68 ntBASIC2.62□□□□□ -1.99
VPS11Q9H270 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VPS11Q9H270 RNU6-271P-201ENST00000363858 105 ntBASIC2.61□□□□□ -1.99
VPS11Q9H270 Y_RNA.796-201ENST00000364268 102 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 818.4 ms