Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL606845.1-201ENST00000404881 255 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 MIR1278-201ENST00000408753 81 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 RNA5SP247-201ENST00000411181 105 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 AL163195.1-201ENST00000496941 348 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 AC024995.1-201ENST00000523014 93 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 AC015712.3-201ENST00000559380 164 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 MIR4648-201ENST00000580107 72 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 AC131280.1-202ENST00000624067 4211 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 SNORA67.1-201ENST00000364749 141 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-804P-201ENST00000384286 107 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 RNU11-3P-201ENST00000391111 133 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 AL359511.1-201ENST00000402970 211 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 RNU4-53P-201ENST00000410828 140 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 AC099677.2-201ENST00000436385 175 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 AC109810.1-201ENST00000534066 224 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 AC005786.1-201ENST00000588553 154 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 MIR6079-201ENST00000635807 62 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 AC018630.2-201ENST00000534866 2403 ntBASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
AMBRA1Q9C0C7 AC100821.1-201ENST00000523153 2479 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.8-201ENST00000362353 102 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 SNORA33-201ENST00000363664 130 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 SNORD114-30-201ENST00000364448 72 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.272-201ENST00000364696 102 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 MIR524-201ENST00000385242 87 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.621-201ENST00000411065 96 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 RNU5E-9P-201ENST00000411164 104 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 BX510359.4-201ENST00000423750 193 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 AL356320.1-201ENST00000429616 163 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 SEPT7P4-201ENST00000437076 306 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 AL121914.1-201ENST00000450188 156 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 AC233266.1-201ENST00000454518 96 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 AC005840.1-201ENST00000498412 377 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 RNA5SP458-201ENST00000516188 119 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-341P-201ENST00000516973 96 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 MIR4431-201ENST00000579990 94 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 AC242852.1-201ENST00000612151 96 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 AC244015.1-201ENST00000622301 99 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 MIR1291-201ENST00000627649 87 ntBASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
AMBRA1Q9C0C7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-774P-201ENST00000363238 107 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.170-201ENST00000363746 110 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 RNU4-84P-201ENST00000364200 139 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-728P-201ENST00000365375 104 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 MIR562-201ENST00000384894 95 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.580-201ENST00000391004 95 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.587-201ENST00000391210 103 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 SNORA11.4-201ENST00000408823 129 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 RN7SKP101-201ENST00000411376 320 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 AL591806.2-201ENST00000433122 173 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 RNU7-94P-201ENST00000459576 63 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 RPS26P45-201ENST00000471748 340 ntBASIC2.17□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-1209P-201ENST00000363655 107 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.267-201ENST00000364679 109 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.398-201ENST00000383952 99 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-1080P-201ENST00000383982 107 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.506-201ENST00000384494 102 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 Z98742.3-201ENST00000418637 326 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 SNRPGP8-201ENST00000454064 226 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 AC023449.1-201ENST00000454464 154 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-561P-201ENST00000516222 102 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 AL358944.1-201ENST00000528537 144 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 RPL23AP91-201ENST00000569211 455 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 MIR3133-201ENST00000583157 78 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 AC012640.5-201ENST00000623897 319 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 AC022513.1-201ENST00000624512 117 ntBASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
AMBRA1Q9C0C7 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
AMBRA1Q9C0C7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.15□□□□□ -2.07
AMBRA1Q9C0C7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.15□□□□□ -2.07
AMBRA1Q9C0C7 RNU6-239P-201ENST00000390990 99 ntBASIC2.15□□□□□ -2.07
AMBRA1Q9C0C7 AC103810.6-201ENST00000606708 136 ntBASIC2.15□□□□□ -2.07
AMBRA1Q9C0C7 AL021707.8-201ENST00000609428 183 ntBASIC2.15□□□□□ -2.07
AMBRA1Q9C0C7 MIR203B-201ENST00000636080 86 ntBASIC2.15□□□□□ -2.07
AMBRA1Q9C0C7 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
AMBRA1Q9C0C7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 RNU6-125P-201ENST00000384505 107 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 MIR518A2-201ENST00000384966 87 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 MIR15B-201ENST00000385045 98 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 Y_RNA.622-201ENST00000411091 108 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 RNU2-55P-201ENST00000411146 174 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 AL392103.1-201ENST00000447000 198 ntBASIC2.14□□□□□ -2.07
AMBRA1Q9C0C7 AC011753.1-201ENST00000451001 220 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms