Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 RNA5SP456-201ENST00000364002 114 ntBASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 RNU2-70P-201ENST00000410718 179 ntBASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 Y_RNA.649-201ENST00000459077 103 ntBASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 RPS27P22-201ENST00000478056 241 ntBASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 SNORD59.2-201ENST00000516873 68 ntBASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 AC091178.2-201ENST00000584401 117 ntBASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 AP001318.4-201ENST00000616637 121 ntBASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CNTNAP4Q9C0A0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 MIR488-201ENST00000365739 83 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 Y_RNA.466-201ENST00000384294 113 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 SNORA51.10-201ENST00000384418 136 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 AL603914.1-201ENST00000401964 204 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 AC009414.1-201ENST00000427200 443 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 HMGN2P3-201ENST00000433603 273 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 HMGN2P5-201ENST00000436882 273 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 HMGN2P32-201ENST00000444648 269 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 AC245102.2-201ENST00000448956 180 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 RN7SKP19-201ENST00000516016 252 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 RNA5SP458-201ENST00000516188 119 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 RNU6-711P-201ENST00000517255 106 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 AL049861.1-201ENST00000603130 150 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 UCA1.1-201ENST00000620952 75 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 AC092881.1-201ENST00000638218 2733 ntBASIC3.12□□□□□ -1.91
CNTNAP4Q9C0A0 AC091564.4-201ENST00000533934 2194 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 RNU1-22P-201ENST00000363334 158 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 RNU6-309P-201ENST00000364573 106 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 RNU6-1138P-201ENST00000365359 106 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 RNU6-573P-201ENST00000383938 106 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 RNU6-418P-201ENST00000384035 107 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 SNORD72-201ENST00000390994 80 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 RNU6-592P-201ENST00000411333 103 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 HMGN2P18-201ENST00000450680 270 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 AC090515.1-201ENST00000465295 476 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 RNA5SP445-201ENST00000515889 115 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 RNA5SP281-201ENST00000516504 135 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 RNU6-63P-201ENST00000516690 95 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 IGKV1-22-201ENST00000524313 326 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 AC046143.2-201ENST00000609789 160 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 MIR1291-201ENST00000627649 87 ntBASIC3.11□□□□□ -1.91
CNTNAP4Q9C0A0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 SNORD114-1-201ENST00000362705 72 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 RNU6-647P-201ENST00000364243 107 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 Y_RNA.634-201ENST00000364811 113 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 Y_RNA.328-201ENST00000365208 113 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 Y_RNA.558-201ENST00000384685 113 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 MIR1287-201ENST00000408492 90 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 AC104389.3-201ENST00000445629 235 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 CYP2C59P-201ENST00000457790 269 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 AC097462.1-201ENST00000514125 324 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 SCARNA3-201ENST00000517097 143 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 AC027419.1-201ENST00000522976 328 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 RPL23AP91-201ENST00000569211 455 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 XIST_intron.1-201ENST00000619444 68 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 MIR5739-201ENST00000619803 80 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 AC110079.1-202ENST00000635213 138 ntBASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CNTNAP4Q9C0A0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 RNU1-72P-201ENST00000362976 153 ntBASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 Y_RNA.242-201ENST00000364473 110 ntBASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 RNU6-546P-201ENST00000383991 107 ntBASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 SNORA4.4-201ENST00000515921 135 ntBASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 RNU7-172P-201ENST00000517125 64 ntBASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 AC105245.1-201ENST00000581934 244 ntBASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 MIR4438-201ENST00000585271 93 ntBASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 AL929325.1-201ENST00000603096 117 ntBASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.09□□□□□ -1.91
CNTNAP4Q9C0A0 AC091152.2-201ENST00000591628 2569 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 RNU6-766P-201ENST00000362478 107 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.281-201ENST00000364774 94 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 Y_RNA.338-201ENST00000365320 114 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 MIR562-201ENST00000384894 95 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 AC016909.1-201ENST00000415916 166 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 SNORD11-201ENST00000459124 84 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 AC080013.2-201ENST00000460866 323 ntBASIC3.08□□□□□ -1.92
CNTNAP4Q9C0A0 OR9P1P-201ENST00000496431 281 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms