Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 AC025033.1-201ENST00000463883 194 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 AL049830.1-201ENST00000468034 425 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 MIR2681-201ENST00000581814 105 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 AL929325.1-201ENST00000603096 117 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 MIR8054-201ENST00000620877 86 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 AP000553.5-201ENST00000641933 54 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 RNU6-674P-201ENST00000363831 107 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 Y_RNA.203-201ENST00000364106 102 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 Y_RNA.265-201ENST00000364677 108 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 RNU6-296P-201ENST00000384608 107 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 RN7SKP200-201ENST00000410564 320 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 AL139156.1-201ENST00000412785 841 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 COX6CP10-201ENST00000416832 224 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 AC108059.2-201ENST00000434626 151 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 snoU13.26-201ENST00000459452 105 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 RNA5SP437-201ENST00000517249 129 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 RNU6-794P-201ENST00000517261 64 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 AC100767.1-201ENST00000528178 123 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 AC130289.1-201ENST00000577321 73 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 AC011921.3-201ENST00000605540 361 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 SNORA28-201ENST00000606769 126 ntBASIC2.09□□□□□ -2.07
TRIM54Q9BYV2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
TRIM54Q9BYV2 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 ZNF658B-202ENST00000615961 3375 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 RNU4-41P-201ENST00000364426 143 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 MIR526A2-201ENST00000390198 65 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 RNU6-440P-201ENST00000390882 105 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 RNU7-28P-201ENST00000516759 62 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 MIR5688-201ENST00000580619 83 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 MIR4769-201ENST00000584126 77 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 JPX_2.1-201ENST00000614161 69 ntBASIC2.08□□□□□ -2.08
TRIM54Q9BYV2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 RNU6-200P-201ENST00000364743 107 ntBASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 RNU4-17P-201ENST00000365598 141 ntBASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 RNA5SP482-201ENST00000391269 118 ntBASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 HSPE1P9-201ENST00000440046 311 ntBASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 RNA5SP233-201ENST00000459153 113 ntBASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 SNORA31.17-201ENST00000516953 127 ntBASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM54Q9BYV2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 MIR411-201ENST00000362239 96 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 RNU6-653P-201ENST00000363074 106 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 Y_RNA.308-201ENST00000365043 101 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 RNA5SP425-201ENST00000410336 112 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 RNU6-383P-201ENST00000410864 94 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 AC009310.1-201ENST00000414414 451 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 AC244636.1-201ENST00000421152 228 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 STAG3L5P-204ENST00000443759 179 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 snoU13.27-201ENST00000459278 104 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 RNU7-34P-201ENST00000459394 64 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 HMGN1P7-201ENST00000491722 313 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 AC008413.1-201ENST00000511864 177 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 Y_RNA.714-201ENST00000517065 90 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 MIR4709-201ENST00000577272 72 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 MIR3668-201ENST00000582138 75 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 Z83818.1-201ENST00000603584 150 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
TRIM54Q9BYV2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 Y_RNA.24-201ENST00000362508 103 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 RNU4-10P-201ENST00000364383 140 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 Y_RNA.253-201ENST00000364562 112 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 Y_RNA.297-201ENST00000364950 91 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 RNA5SP138-201ENST00000365098 114 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 SNORA4.2-201ENST00000365313 147 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 RNU6-969P-201ENST00000383900 105 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 MIR626-201ENST00000385032 94 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 AL034345.1-201ENST00000407768 123 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 RN7SKP192-201ENST00000411291 327 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 AC023449.1-201ENST00000454464 154 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 RNU6-138P-201ENST00000515952 107 ntBASIC2.05□□□□□ -2.08
TRIM54Q9BYV2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms