Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AP000648.3-201ENST00000623539 4507 ntBASIC1.51□□□□□ -2.17
RAD9AQ99638 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.51□□□□□ -2.17
RAD9AQ99638 Y_RNA.172-201ENST00000363765 102 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 RNY1-201ENST00000364228 113 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 Y_RNA.286-201ENST00000364813 102 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 Y_RNA.326-201ENST00000365176 113 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 RNU6-203P-201ENST00000384038 104 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 SNORD116-13-201ENST00000384408 92 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 RNU6-1031P-201ENST00000384773 107 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 MIR194-1-201ENST00000384892 85 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 MIR520G-201ENST00000385064 90 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 MIR613-201ENST00000385248 95 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 RNU6-710P-201ENST00000410424 105 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 Y_RNA.602-201ENST00000410535 92 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.5□□□□□ -2.17
RAD9AQ99638 ELOCP20-201ENST00000422460 345 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 AL162725.1-201ENST00000435405 301 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.5□□□□□ -2.17
RAD9AQ99638 RNU6-1291P-201ENST00000516591 104 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 AL442663.2-201ENST00000554385 511 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
RAD9AQ99638 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RAD9AQ99638 MIR96-201ENST00000362288 78 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 Y_RNA.105-201ENST00000363182 111 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 SNORA63-201ENST00000363450 132 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 Y_RNA.152-201ENST00000363578 100 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 Y_RNA.153-201ENST00000363615 91 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 RNU6-770P-201ENST00000363929 105 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 Y_RNA.214-201ENST00000364201 112 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 Y_RNA.383-201ENST00000383855 97 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 Y_RNA.422-201ENST00000384054 114 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 AC024067.1-201ENST00000426199 223 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 POLR2KP2-201ENST00000438155 177 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 AC233266.1-201ENST00000454518 96 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 AC099513.1-201ENST00000490423 301 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 RNY3P15-201ENST00000516297 97 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 RNU2-56P-201ENST00000516826 190 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 RNU6-1096P-201ENST00000517089 102 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.49□□□□□ -2.17
RAD9AQ99638 MIR3145-201ENST00000580727 82 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 AC242852.1-201ENST00000612151 96 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 AC244015.1-201ENST00000622301 99 ntBASIC1.49□□□□□ -2.17
RAD9AQ99638 ICE2P2-201ENST00000483823 2787 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 RNU6-1123P-201ENST00000362347 106 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 Y_RNA.276-201ENST00000364732 109 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 AL034345.1-201ENST00000407768 123 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 RNU6-855P-201ENST00000410395 104 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 RNU6-121P-201ENST00000410525 99 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 AC113618.1-201ENST00000416747 285 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.48□□□□□ -2.17
RAD9AQ99638 HSPE1P24-201ENST00000450782 238 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.48□□□□□ -2.17
RAD9AQ99638 AP002004.2-201ENST00000531656 154 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 SNORA28-201ENST00000606769 126 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 AC004832.4-201ENST00000608952 331 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 Y_RNA.812-201ENST00000610788 101 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 AC021506.2-201ENST00000612354 169 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 Y_RNA.784-201ENST00000613803 101 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 Y_RNA.787-201ENST00000616522 101 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 Y_RNA.780-201ENST00000617336 101 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 Y_RNA.801-201ENST00000619005 101 ntBASIC1.48□□□□□ -2.17
RAD9AQ99638 Y_RNA.19-201ENST00000362462 99 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 SNORA1B-201ENST00000362535 133 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 Y_RNA.265-201ENST00000364677 108 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 RNU6-102P-201ENST00000384485 104 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 AL590004.1-201ENST00000405321 300 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 STAG3L5P-204ENST00000443759 179 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 RPS4XP11-201ENST00000446897 772 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 RPS20P10-201ENST00000451209 253 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 LINC01399-202ENST00000458450 244 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 MRPS35P2-201ENST00000508242 191 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 RNU6-496P-201ENST00000516145 99 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 AC006504.6-201ENST00000590142 199 ntBASIC1.47□□□□□ -2.17
RAD9AQ99638 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RAD9AQ99638 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RAD9AQ99638 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
RAD9AQ99638 MIR302D-201ENST00000362275 68 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 SNORD33-201ENST00000362761 85 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 RNU4-90P-201ENST00000362773 141 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 Y_RNA.222-201ENST00000364264 102 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 RNU6-806P-201ENST00000365147 105 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 Y_RNA.341-201ENST00000365341 102 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 SNORA12.1-201ENST00000390873 148 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 PGBD4P5-201ENST00000445958 426 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 HSPE1P25-201ENST00000455484 251 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 HMGN1P10-201ENST00000474557 553 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 AC098869.1-201ENST00000481627 292 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 RNU6-1143P-201ENST00000516125 104 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 RNU7-28P-201ENST00000516759 62 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.46□□□□□ -2.18
RAD9AQ99638 AL358944.1-201ENST00000528537 144 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 AC015688.6-201ENST00000577737 104 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 AC005972.2-201ENST00000604690 348 ntBASIC1.46□□□□□ -2.18
RAD9AQ99638 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.46□□□□□ -2.18
RAD9AQ99638 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
RAD9AQ99638 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms