Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SNORD115-6-201ENST00000363942 82 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 SNORD115-42-201ENST00000364273 82 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 SNORD115-15-201ENST00000364809 81 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 SNORD115-1-201ENST00000364961 82 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 SNORD115-26-201ENST00000365067 82 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 SNORD115-10-201ENST00000365073 81 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 SNORD115-43-201ENST00000365503 82 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 SNORD115-36-201ENST00000365629 82 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 RNU6-163P-201ENST00000384396 106 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 RNU6-950P-201ENST00000384651 107 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 RN7SL93P-201ENST00000463035 293 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.72□□□□□ -1.81
PHOX2BQ99453 AC022523.2-201ENST00000561045 150 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 AC062037.1-201ENST00000605302 128 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 AC244205.2-202ENST00000635781 342 ntBASIC3.72□□□□□ -1.81
PHOX2BQ99453 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PHOX2BQ99453 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
PHOX2BQ99453 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PHOX2BQ99453 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PHOX2BQ99453 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PHOX2BQ99453 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.71□□□□□ -1.81
PHOX2BQ99453 RNY3P2-201ENST00000362918 102 ntBASIC3.71□□□□□ -1.82
PHOX2BQ99453 Y_RNA.96-201ENST00000363092 109 ntBASIC3.71□□□□□ -1.82
PHOX2BQ99453 RNY1P7-201ENST00000384743 110 ntBASIC3.71□□□□□ -1.82
PHOX2BQ99453 MIR1262-201ENST00000408276 93 ntBASIC3.71□□□□□ -1.82
PHOX2BQ99453 MIR5680-201ENST00000577577 84 ntBASIC3.71□□□□□ -1.82
PHOX2BQ99453 MIR4769-201ENST00000584126 77 ntBASIC3.71□□□□□ -1.82
PHOX2BQ99453 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.71□□□□□ -1.82
PHOX2BQ99453 MIR7702-201ENST00000621931 59 ntBASIC3.71□□□□□ -1.82
PHOX2BQ99453 AL137790.1-201ENST00000634283 177 ntBASIC3.71□□□□□ -1.82
PHOX2BQ99453 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
PHOX2BQ99453 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PHOX2BQ99453 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PHOX2BQ99453 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PHOX2BQ99453 RNU6-461P-201ENST00000364195 107 ntBASIC3.7□□□□□ -1.82
PHOX2BQ99453 Y_RNA.241-201ENST00000364470 117 ntBASIC3.7□□□□□ -1.82
PHOX2BQ99453 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PHOX2BQ99453 RNU6-998P-201ENST00000515894 101 ntBASIC3.7□□□□□ -1.82
PHOX2BQ99453 Y_RNA.685-201ENST00000516532 108 ntBASIC3.7□□□□□ -1.82
PHOX2BQ99453 AC026421.1-201ENST00000519101 163 ntBASIC3.7□□□□□ -1.82
PHOX2BQ99453 AC005786.1-201ENST00000588553 154 ntBASIC3.7□□□□□ -1.82
PHOX2BQ99453 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PHOX2BQ99453 AP006437.1-201ENST00000641440 3685 ntBASIC3.7□□□□□ -1.82
PHOX2BQ99453 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PHOX2BQ99453 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PHOX2BQ99453 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PHOX2BQ99453 MIR342-201ENST00000362212 99 ntBASIC3.69□□□□□ -1.82
PHOX2BQ99453 SNORD115-19-201ENST00000363098 82 ntBASIC3.69□□□□□ -1.82
PHOX2BQ99453 SNORD115-18-201ENST00000363293 82 ntBASIC3.69□□□□□ -1.82
PHOX2BQ99453 SNORD115-17-201ENST00000364612 82 ntBASIC3.69□□□□□ -1.82
PHOX2BQ99453 Y_RNA.342-201ENST00000365352 113 ntBASIC3.69□□□□□ -1.82
PHOX2BQ99453 Y_RNA.466-201ENST00000384294 113 ntBASIC3.69□□□□□ -1.82
PHOX2BQ99453 SNX2P2-201ENST00000424553 323 ntBASIC3.69□□□□□ -1.82
PHOX2BQ99453 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.69□□□□□ -1.82
PHOX2BQ99453 RN7SL594P-201ENST00000470590 287 ntBASIC3.69□□□□□ -1.82
PHOX2BQ99453 RPS23P4-201ENST00000487908 423 ntBASIC3.69□□□□□ -1.82
PHOX2BQ99453 AC114811.1-201ENST00000507207 168 ntBASIC3.69□□□□□ -1.82
PHOX2BQ99453 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PHOX2BQ99453 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PHOX2BQ99453 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PHOX2BQ99453 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PHOX2BQ99453 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PHOX2BQ99453 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
PHOX2BQ99453 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PHOX2BQ99453 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PHOX2BQ99453 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PHOX2BQ99453 RNA5SP173-201ENST00000364857 136 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 RNU6-1134P-201ENST00000365156 101 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 SNORA1.2-201ENST00000365189 134 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 MIR29C-201ENST00000385231 88 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 RNA5SP144-201ENST00000410846 116 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 PGBD4P5-201ENST00000445958 426 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 RNU6-638P-201ENST00000516582 104 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 IGLV3-17-201ENST00000519099 244 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 MIR3169-201ENST00000578032 83 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 MIR4694-201ENST00000578534 80 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 MIR8054-201ENST00000620877 86 ntBASIC3.68□□□□□ -1.82
PHOX2BQ99453 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.68□□□□□ -1.82
PHOX2BQ99453 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PHOX2BQ99453 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PHOX2BQ99453 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
PHOX2BQ99453 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PHOX2BQ99453 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PHOX2BQ99453 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PHOX2BQ99453 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.67□□□□□ -1.82
PHOX2BQ99453 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.67□□□□□ -1.82
PHOX2BQ99453 RNU6-1099P-201ENST00000363533 107 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 Y_RNA.531-201ENST00000384589 121 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.67□□□□□ -1.82
PHOX2BQ99453 STAG3L5P-204ENST00000443759 179 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 AC091826.1-201ENST00000514065 313 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 uc_338.25-201ENST00000613756 156 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 AL590808.1-201ENST00000618696 141 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 AC021613.1-201ENST00000623880 111 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 MAPK10-362ENST00000641864 4484 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PHOX2BQ99453 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms