Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 RNU7-80P-201ENST00000459562 61 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 RN7SL93P-201ENST00000463035 293 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 RPL23AP63-201ENST00000498752 471 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 RAC1P2-201ENST00000511164 579 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 ELOCP29-201ENST00000588193 334 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 AC022217.4-201ENST00000604389 163 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 MIR7157-201ENST00000635801 60 ntBASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CNTNAP3BQ96NU0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 RNU4-16P-201ENST00000364737 141 ntBASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 SNORD6-201ENST00000365444 73 ntBASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 FTH1P12-201ENST00000432137 551 ntBASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 SNORD59.2-201ENST00000516873 68 ntBASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 U7.4-201ENST00000614961 63 ntBASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.48□□□□□ -1.85
CNTNAP3BQ96NU0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 AL021368.2-201ENST00000606125 5352 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 MIR126-201ENST00000362291 85 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 MIR522-201ENST00000385071 87 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 MICF-203ENST00000432679 129 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 SNRPGP14-201ENST00000435400 219 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 RNU7-170P-201ENST00000459303 61 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 AC090255.1-201ENST00000495779 349 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 AC078899.2-201ENST00000595282 212 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 AC110079.1-202ENST00000635213 138 ntBASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.47□□□□□ -1.85
CNTNAP3BQ96NU0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CNTNAP3BQ96NU0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
CNTNAP3BQ96NU0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CNTNAP3BQ96NU0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 RNU1-18P-201ENST00000363062 164 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 RNA5SP508-201ENST00000411327 119 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 AL159169.1-201ENST00000421119 127 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 AL445646.1-201ENST00000431784 216 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 AC233266.1-201ENST00000454518 96 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 SNORA31.4-201ENST00000516049 129 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 SNORA70.18-201ENST00000516696 98 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 AC242852.1-201ENST00000612151 96 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 AC244015.1-201ENST00000622301 99 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
CNTNAP3BQ96NU0 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 SNORD115-27-201ENST00000364430 82 ntBASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 RNU6-524P-201ENST00000384270 107 ntBASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 RN7SKP200-201ENST00000410564 320 ntBASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 RNA5SP356-201ENST00000515972 94 ntBASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 RNU6-1291P-201ENST00000516591 104 ntBASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 Y_RNA.714-201ENST00000517065 90 ntBASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
CNTNAP3BQ96NU0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 RNU6-268P-201ENST00000364174 107 ntBASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 Y_RNA.299-201ENST00000364973 94 ntBASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 AL022718.1-201ENST00000412004 84 ntBASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 SNORA18.7-201ENST00000516910 131 ntBASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 AL358944.1-201ENST00000528537 144 ntBASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 AP003484.1-201ENST00000530974 250 ntBASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 U2.20-201ENST00000613956 192 ntBASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 AC018630.2-201ENST00000534866 2403 ntBASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
CNTNAP3BQ96NU0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 RNU6-1313P-201ENST00000362622 102 ntBASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 RNU6-539P-201ENST00000516665 103 ntBASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 SCARNA3-201ENST00000517097 143 ntBASIC3.43□□□□□ -1.86
CNTNAP3BQ96NU0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms