Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 MIR7515-201ENST00000637837 67 ntBASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MS4A3Q96HJ5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 SNORD45.1-201ENST00000363181 77 ntBASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 Y_RNA.207-201ENST00000364142 106 ntBASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 RNU6-1051P-201ENST00000365471 102 ntBASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 RPS12P10-201ENST00000427031 377 ntBASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 RN7SL459P-201ENST00000481078 302 ntBASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 SNORA70.19-201ENST00000516717 90 ntBASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MS4A3Q96HJ5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 RNY4P3-201ENST00000365254 95 ntBASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 SNORA40.6-201ENST00000391153 128 ntBASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 HMGN2P39-201ENST00000398005 273 ntBASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 Y_RNA.606-201ENST00000410579 103 ntBASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 HLA-N-201ENST00000437516 135 ntBASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 AC110079.1-202ENST00000635213 138 ntBASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 AC015813.6-201ENST00000624409 5808 ntBASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MS4A3Q96HJ5 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
MS4A3Q96HJ5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
MS4A3Q96HJ5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 SNORD113.1-201ENST00000363280 73 ntBASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 SNORD74.4-201ENST00000364129 80 ntBASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 SNORD38B-201ENST00000384690 67 ntBASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 MIR526A1-201ENST00000384897 85 ntBASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 SNORA71B-202ENST00000439232 272 ntBASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 AC245517.4-201ENST00000448601 281 ntBASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 AL691482.2-201ENST00000457453 84 ntBASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 SNORD38B-202ENST00000625943 69 ntBASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
MS4A3Q96HJ5 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 SNORA56-201ENST00000383966 129 ntBASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 AC121758.2-201ENST00000553271 193 ntBASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 AC008745.1-201ENST00000604064 271 ntBASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 AC110741.2-201ENST00000605278 268 ntBASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 MIR6748-201ENST00000610433 71 ntBASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 MIR7978-201ENST00000636158 59 ntBASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 U6.109-201ENST00000636749 87 ntBASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.95□□□□□ -1.78
MS4A3Q96HJ5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A3Q96HJ5 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A3Q96HJ5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A3Q96HJ5 RNU6-23P-201ENST00000363283 107 ntBASIC3.94□□□□□ -1.78
MS4A3Q96HJ5 SNORA25B-201ENST00000365507 128 ntBASIC3.94□□□□□ -1.78
MS4A3Q96HJ5 SNORA74.3-201ENST00000517108 154 ntBASIC3.94□□□□□ -1.78
MS4A3Q96HJ5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A3Q96HJ5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A3Q96HJ5 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A3Q96HJ5 RNU6-1031P-201ENST00000384773 107 ntBASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 MIR129-1-201ENST00000384972 72 ntBASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 SNORA59A-201ENST00000459326 152 ntBASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 AC025445.1-201ENST00000502728 300 ntBASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 SCARNA14-201ENST00000516903 136 ntBASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 AC091178.1-203ENST00000584586 279 ntBASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 AC022513.1-201ENST00000624512 117 ntBASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 AC008133.2-201ENST00000624540 351 ntBASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MS4A3Q96HJ5 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 Y_RNA.119-201ENST00000363301 96 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 MIR2113-201ENST00000459007 91 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 snoU13.1-201ENST00000459157 104 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 AC006463.2-201ENST00000473326 348 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 AC023141.11-201ENST00000508864 202 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 RNU7-43P-201ENST00000516554 64 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 IFITM8P-201ENST00000522529 394 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 MIR4764-201ENST00000580680 88 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 MIR4715-201ENST00000584117 79 ntBASIC3.92□□□□□ -1.78
MS4A3Q96HJ5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms