| REPS1 | Q96D71 | RNU4-41P-201 | ENST00000364426 | 143 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | Y_RNA.343-201 | ENST00000365354 | 112 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | SNORA6-201 | ENST00000384033 | 151 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU6-160P-201 | ENST00000384591 | 107 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU6-417P-201 | ENST00000384712 | 107 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | MIR15B-201 | ENST00000385045 | 98 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | EDDM3CP-201 | ENST00000415977 | 425 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC079804.2-201 | ENST00000490376 | 200 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU7-121P-201 | ENST00000516604 | 62 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC138625.2-201 | ENST00000563968 | 551 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC007229.1-201 | ENST00000590455 | 412 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | Y_RNA.778-201 | ENST00000620203 | 90 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | MIR6132-201 | ENST00000622083 | 109 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | Clostridiales-1.3-201 | ENST00000637703 | 147 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | CYLC2-202 | ENST00000487798 | 2053 nt | APPRIS P1 TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AL596028.1-201 | ENST00000326971 | 197 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | U8.2-201 | ENST00000363156 | 134 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | Y_RNA.337-201 | ENST00000365312 | 102 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | Y_RNA.488-201 | ENST00000384403 | 102 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AL358234.1-201 | ENST00000421132 | 273 nt | TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RPS4XP11-201 | ENST00000446897 | 772 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU1-131P-201 | ENST00000458943 | 161 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | snoU13.15-201 | ENST00000459407 | 104 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU6-1041P-201 | ENST00000516254 | 102 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC007598.1-202 | ENST00000561528 | 435 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | MIR2681-201 | ENST00000581814 | 105 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AL160408.5-201 | ENST00000607759 | 526 nt | TSL 4 BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | ZNFX1-AS1_2.1-201 | ENST00000610973 | 93 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | OR5M1-202 | ENST00000641076 | 4302 nt | APPRIS P1 BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | USP53-202 | ENST00000450251 | 6072 nt | APPRIS P1 TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU6-151P-201 | ENST00000364158 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU1-96P-201 | ENST00000364163 | 162 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | Y_RNA.215-201 | ENST00000364204 | 112 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU6-643P-201 | ENST00000384018 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | MIR520G-201 | ENST00000385064 | 90 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU6-1186P-201 | ENST00000410429 | 97 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RN7SKP192-201 | ENST00000411291 | 327 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RN7SKP101-201 | ENST00000411376 | 320 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC006461.1-201 | ENST00000412637 | 326 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | SNORD116-25-201 | ENST00000516517 | 92 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC090155.2-201 | ENST00000518854 | 267 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | TRAV1-1-201 | ENST00000542354 | 392 nt | APPRIS P1 BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC011604.1-201 | ENST00000545978 | 196 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | DNAJC19P2-201 | ENST00000593340 | 302 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC073413.2-201 | ENST00000604332 | 360 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | SNORD14A-201 | ENST00000606526 | 91 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC091965.1-202 | ENST00000607662 | 397 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AL353149.1-201 | ENST00000610667 | 244 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | KTN1-203 | ENST00000395309 | 4021 nt | APPRIS ALT2 TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | ZNF658B-202 | ENST00000615961 | 3375 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 2.17 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | Y_RNA.203-201 | ENST00000364106 | 102 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | SNORA79-201 | ENST00000408376 | 140 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | MIR1278-201 | ENST00000408753 | 81 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU4-53P-201 | ENST00000410828 | 140 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC245102.2-201 | ENST00000448956 | 180 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU6-561P-201 | ENST00000516222 | 102 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | RNU7-99P-201 | ENST00000516271 | 62 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AL929325.1-201 | ENST00000603096 | 117 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AL359075.3-201 | ENST00000613288 | 217 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | AC009831.4-201 | ENST00000620744 | 325 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | MIR338-201 | ENST00000636369 | 67 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| REPS1 | Q96D71 | OSTN-201 | ENST00000339051 | 402 nt | APPRIS P1 TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | SNORA3A-201 | ENST00000364113 | 130 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | SNORA48.3-201 | ENST00000391081 | 134 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | SNORA3.2-201 | ENST00000408221 | 125 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | MIR1262-201 | ENST00000408276 | 93 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | RNU4-43P-201 | ENST00000410628 | 137 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | LINC01073-201 | ENST00000441659 | 149 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | ATP5J2P3-201 | ENST00000451550 | 258 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AC023449.1-201 | ENST00000454464 | 154 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | RNA5SP200-201 | ENST00000516360 | 103 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | RNA5SP281-201 | ENST00000516504 | 135 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | RNU6-1096P-201 | ENST00000517089 | 102 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AC026271.5-201 | ENST00000577873 | 130 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AL021707.8-201 | ENST00000609428 | 183 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AC012640.5-201 | ENST00000623897 | 319 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AP000553.5-201 | ENST00000641933 | 54 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | ARHGAP15-202 | ENST00000409869 | 2968 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | PRKD3-201 | ENST00000234179 | 5900 nt | APPRIS P1 TSL 1 (best) BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | SNORD114-6-201 | ENST00000364393 | 72 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | Y_RNA.497-201 | ENST00000384447 | 98 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | MIR515-2-201 | ENST00000384883 | 83 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | MIR515-1-201 | ENST00000384884 | 83 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | RNA5SP467-201 | ENST00000391274 | 118 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | RNA5SP425-201 | ENST00000410336 | 112 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | Y_RNA.622-201 | ENST00000411091 | 108 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AL606753.1-201 | ENST00000427435 | 87 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AC018634.1-201 | ENST00000437554 | 401 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AC005703.2-201 | ENST00000453339 | 343 nt | TSL 2 BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | RNU1-142P-201 | ENST00000516682 | 145 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AC009930.1-201 | ENST00000522330 | 191 nt | TSL 5 BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AL049861.1-201 | ENST00000603130 | 150 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AC100821.1-201 | ENST00000523153 | 2479 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | AP006437.1-201 | ENST00000641440 | 3685 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | RNU6-199P-201 | ENST00000362954 | 107 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | SNORD45.3-201 | ENST00000363836 | 72 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| REPS1 | Q96D71 | RNU4-11P-201 | ENST00000365287 | 132 nt | BASIC | 2.13 | □□□□□ -2.07 | | |