| FOXJ1 | Q92949 | Y_RNA.99-201 | ENST00000363138 | 105 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | Y_RNA.155-201 | ENST00000363632 | 101 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-283P-201 | ENST00000364788 | 107 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | Y_RNA.360-201 | ENST00000365512 | 102 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-242P-201 | ENST00000384359 | 107 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | MIR577-201 | ENST00000385196 | 96 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | TRAJ17-201 | ENST00000390520 | 63 nt | APPRIS P1 BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | SNORD17-201 | ENST00000390930 | 237 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AL451046.2-201 | ENST00000403074 | 277 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RN7SKP200-201 | ENST00000410564 | 320 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNA5SP144-201 | ENST00000410846 | 116 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AL022718.1-201 | ENST00000412004 | 84 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RPL39P39-201 | ENST00000455840 | 151 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-579P-201 | ENST00000516879 | 102 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AL355297.2-201 | ENST00000604792 | 129 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | HOTAIRM1_4.1-201 | ENST00000617934 | 102 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC244205.2-202 | ENST00000635781 | 342 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | GABRG2-209 | ENST00000638660 | 3799 nt | TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | CEP57L1-216 | ENST00000521522 | 2259 nt | TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | LRMP-221 | ENST00000636465 | 4540 nt | APPRIS ALT2 TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | IQCG-205 | ENST00000455191 | 1981 nt | APPRIS P1 TSL 2 BASIC | 3.51 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | TFEC-203 | ENST00000393485 | 2704 nt | TSL 2 BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AL355596.1-201 | ENST00000565399 | 3996 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | C5orf51-201 | ENST00000381647 | 5241 nt | APPRIS P1 TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | IDE-202 | ENST00000371581 | 4480 nt | TSL 2 BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-170P-201 | ENST00000362832 | 104 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU4-16P-201 | ENST00000364737 | 141 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | Y_RNA.299-201 | ENST00000364973 | 94 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-409P-201 | ENST00000384114 | 104 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | MIR592-201 | ENST00000384959 | 97 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | SNORA48.2-201 | ENST00000390926 | 124 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNA5SP225-201 | ENST00000410874 | 135 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AL138962.1-201 | ENST00000417987 | 411 nt | TSL 5 BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | LINC01866-201 | ENST00000421181 | 201 nt | TSL 3 BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | TRIAP1P1-201 | ENST00000427062 | 225 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU2-13P-201 | ENST00000515909 | 113 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNA5SP367-201 | ENST00000516557 | 118 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-667P-201 | ENST00000517186 | 102 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC022254.1-201 | ENST00000567857 | 235 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC135178.3-204 | ENST00000585181 | 451 nt | TSL 2 BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | HSPE1P19-201 | ENST00000603327 | 295 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | U7.3-201 | ENST00000616123 | 62 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | BCLAF1-213 | ENST00000530767 | 4186 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | CEP57L1-201 | ENST00000359793 | 2515 nt | APPRIS P3 TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | PLPPR4-201 | ENST00000370184 | 4505 nt | TSL 5 BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | KIAA1107-203 | ENST00000637221 | 4337 nt | TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | PGGT1B-203 | ENST00000419445 | 9545 nt | APPRIS P1 TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNA5SP42-201 | ENST00000364278 | 115 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | SNORD38C-201 | ENST00000384381 | 69 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-644P-201 | ENST00000391155 | 98 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | MIR1255A-201 | ENST00000408338 | 113 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC004812.1-201 | ENST00000540773 | 146 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AP005264.4-201 | ENST00000592203 | 422 nt | TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | SCARNA15.3-201 | ENST00000626315 | 122 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | SCARNA4.1-201 | ENST00000628597 | 123 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | MIR203B-201 | ENST00000636080 | 86 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RAD17-202 | ENST00000305138 | 3164 nt | TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | ADGRG2-206 | ENST00000360279 | 4702 nt | TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | MFSD8-233 | ENST00000641482 | 4860 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | ABCC9-202 | ENST00000261201 | 4650 nt | APPRIS ALT1 TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | DCUN1D1-201 | ENST00000292782 | 7954 nt | APPRIS P1 TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | SOCS4-201 | ENST00000339298 | 6667 nt | APPRIS P1 TSL 1 (best) BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AGL-205 | ENST00000370163 | 7166 nt | APPRIS P1 TSL 1 (best) BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | EXOC6-203 | ENST00000371552 | 3564 nt | TSL 5 BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | ERBIN-204 | ENST00000380943 | 6410 nt | APPRIS P3 TSL 1 (best) BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU4-67P-201 | ENST00000364569 | 141 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-1276P-201 | ENST00000365372 | 104 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | SNORA27-201 | ENST00000384323 | 126 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC115115.1-201 | ENST00000449927 | 248 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC006539.3-201 | ENST00000454258 | 129 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | SNORA59A-201 | ENST00000459326 | 152 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU7-96P-201 | ENST00000459535 | 64 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RN7SL297P-201 | ENST00000483161 | 293 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC108752.1-201 | ENST00000484679 | 576 nt | TSL 5 BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC023141.11-201 | ENST00000508864 | 202 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC012531.4-201 | ENST00000616509 | 177 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | FAS-AS1.2-201 | ENST00000620386 | 170 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | MIR1255B1-201 | ENST00000636325 | 63 nt | BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | DICER1-203 | ENST00000526495 | 10331 nt | APPRIS P1 TSL 5 BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | KTN1-207 | ENST00000438792 | 4449 nt | APPRIS ALT2 TSL 5 BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | FOXP2-206 | ENST00000393491 | 6085 nt | TSL 5 BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | NUFIP2-201 | ENST00000225388 | 10850 nt | APPRIS P1 TSL 1 (best) BASIC | 3.48 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | DMXL1-201 | ENST00000311085 | 11072 nt | APPRIS P1 TSL 1 (best) BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | ERMN-205 | ENST00000410096 | 3793 nt | APPRIS P1 TSL 1 (best) BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | PSMA5-201 | ENST00000271308 | 3729 nt | APPRIS P1 TSL 1 (best) BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | OSTN-201 | ENST00000339051 | 402 nt | APPRIS P1 TSL 1 (best) BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | SNORD114-6-201 | ENST00000364393 | 72 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-675P-201 | ENST00000384236 | 104 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-160P-201 | ENST00000384591 | 107 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | MIR128-1-201 | ENST00000384921 | 82 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | MRPL35P3-201 | ENST00000421557 | 364 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | SNX2P2-201 | ENST00000424553 | 323 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AL583835.2-201 | ENST00000435483 | 500 nt | TSL 2 BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | RNU6-998P-201 | ENST00000515894 | 101 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC007536.1-201 | ENST00000533382 | 349 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | MIR7112-201 | ENST00000616126 | 65 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | 5S_rRNA.12-201 | ENST00000617631 | 107 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | AC093010.3-201 | ENST00000570269 | 15214 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | Z83843.1-201 | ENST00000604070 | 3685 nt | BASIC | 3.47 | □□□□□ -1.85 | | |
| FOXJ1 | Q92949 | TBC1D31-214 | ENST00000522420 | 3167 nt | TSL 1 (best) BASIC | 3.47 | □□□□□ -1.85 | | |