Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.64□□□□□ -2.15
SLC44A1Q8WWI5 MIR8081-201ENST00000611533 95 ntBASIC1.64□□□□□ -2.15
SLC44A1Q8WWI5 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.64□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.144-201ENST00000363521 113 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.217-201ENST00000364214 105 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.288-201ENST00000364854 92 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 SNORA4.2-201ENST00000365313 147 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.452-201ENST00000384202 108 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 SNORA72-201ENST00000384339 132 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 RN7SKP200-201ENST00000410564 320 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 AC104332.1-201ENST00000440471 797 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 U8.19-201ENST00000459095 133 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.641-201ENST00000459414 105 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 RNU7-115P-201ENST00000516433 55 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 AL162424.1-201ENST00000602325 221 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 U2.14-201ENST00000615943 113 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 U4.1-201ENST00000620349 87 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 7SK.10-201ENST00000621414 298 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 WWP1P1-201ENST00000466609 2769 ntBASIC1.63□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-1272P-201ENST00000362776 107 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.275-201ENST00000364726 110 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.562-201ENST00000384695 113 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-440P-201ENST00000390882 105 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 RN7SKP101-201ENST00000411376 320 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 COX6CP10-201ENST00000416832 224 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 SNORD127-201ENST00000458892 86 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 RNA5SP458-201ENST00000516188 119 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 RNU7-28P-201ENST00000516759 62 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 SCARNA24.2-201ENST00000516968 130 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 MIR4709-201ENST00000577272 72 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 MIR4255-201ENST00000579351 72 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 MIR4503-201ENST00000582187 83 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 AC068647.2-201ENST00000637380 353 ntBASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SLC44A1Q8WWI5 SNORA1B-201ENST00000362535 133 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.44-201ENST00000362676 108 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.267-201ENST00000364679 109 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-702P-201ENST00000364982 107 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-136P-201ENST00000384663 107 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 SNORA26.5-201ENST00000391215 123 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-970P-201ENST00000516312 107 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-1291P-201ENST00000516591 104 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 RNU2-56P-201ENST00000516826 190 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 AC011604.1-201ENST00000545978 196 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 AC127455.1-201ENST00000565496 145 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 SNORA28-201ENST00000606769 126 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 MIR548AY-201ENST00000617669 107 ntBASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SLC44A1Q8WWI5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.14-201ENST00000362415 103 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-899P-201ENST00000363947 107 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.193-201ENST00000363979 102 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.352-201ENST00000365439 102 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-1031P-201ENST00000384773 107 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 SNORA12.1-201ENST00000390873 148 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 RNU7-141P-201ENST00000459304 62 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 SNORA25.15-201ENST00000516487 89 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 AC024405.2-202ENST00000532731 184 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 MIR3149-201ENST00000584629 83 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 POLR3GP1-201ENST00000594073 261 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 AL929325.1-201ENST00000603096 117 ntBASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SLC44A1Q8WWI5 U8.7-201ENST00000364940 136 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-763P-201ENST00000390865 106 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 RNA5SP482-201ENST00000391269 118 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 AL627390.1-201ENST00000396055 340 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 AL034345.1-201ENST00000407768 123 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 MIR548H3-201ENST00000408771 118 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 RNU2-38P-201ENST00000410856 79 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 RNU2-14P-201ENST00000411053 191 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 JTBP1-201ENST00000441314 247 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 RNU6-1132P-201ENST00000459214 107 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.637-201ENST00000459424 114 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 AC099513.1-201ENST00000490423 301 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 AC004817.2-201ENST00000561794 651 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 AC012433.1-201ENST00000588916 398 ntBASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.59□□□□□ -2.15
SLC44A1Q8WWI5 Y_RNA.82-201ENST00000363000 102 ntBASIC1.58□□□□□ -2.16
SLC44A1Q8WWI5 Y_RNA.92-201ENST00000363043 102 ntBASIC1.58□□□□□ -2.16
SLC44A1Q8WWI5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.58□□□□□ -2.16
SLC44A1Q8WWI5 RNU6-414P-201ENST00000363705 104 ntBASIC1.58□□□□□ -2.16
SLC44A1Q8WWI5 Y_RNA.235-201ENST00000364412 102 ntBASIC1.58□□□□□ -2.16
SLC44A1Q8WWI5 Y_RNA.306-201ENST00000365015 102 ntBASIC1.58□□□□□ -2.16
SLC44A1Q8WWI5 Y_RNA.312-201ENST00000365089 102 ntBASIC1.58□□□□□ -2.16
SLC44A1Q8WWI5 Y_RNA.322-201ENST00000365151 102 ntBASIC1.58□□□□□ -2.16
SLC44A1Q8WWI5 RNA5SP190-201ENST00000365222 118 ntBASIC1.58□□□□□ -2.16
SLC44A1Q8WWI5 RNU6-662P-201ENST00000384253 104 ntBASIC1.58□□□□□ -2.16
SLC44A1Q8WWI5 MIR194-1-201ENST00000384892 85 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms