Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC023141.11-201ENST00000508864 202 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-762P-201ENST00000517107 102 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 AC018630.3-201ENST00000542637 96 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 MIR5007-201ENST00000583098 95 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.76□□□□□ -1.97
SH3RF3Q8TEJ3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 SNORD114-19-201ENST00000363072 75 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-647P-201ENST00000364243 107 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 RNU1-91P-201ENST00000364746 163 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 Y_RNA.432-201ENST00000384087 111 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 MIR586-201ENST00000385035 97 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 SNORA12-201ENST00000391162 147 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 SNORA79-201ENST00000408376 140 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 RN7SKP192-201ENST00000411291 327 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 RNA5SP112-201ENST00000515937 99 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 SCARNA3-201ENST00000517097 143 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-537P-201ENST00000517277 103 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 MIR1273D-201ENST00000577266 86 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 MIR4648-201ENST00000580107 72 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 AC097639.2-201ENST00000603159 172 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 AC106754.2-201ENST00000623006 233 ntBASIC2.75□□□□□ -1.97
SH3RF3Q8TEJ3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 SNORA27.1-201ENST00000362604 124 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 Y_RNA.91-201ENST00000363042 107 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-486P-201ENST00000363116 107 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 Y_RNA.281-201ENST00000364774 94 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-49P-201ENST00000384256 107 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 SNORA72-201ENST00000384339 132 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 RPS12P2-201ENST00000439728 269 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 HMGN2P9-201ENST00000476875 229 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 MIR3199-1-201ENST00000582434 88 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 AL049861.1-201ENST00000603130 150 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-91P-201ENST00000607774 107 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 AC025166.1-201ENST00000612411 163 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 MTND5P18-201ENST00000445624 1801 ntBASIC2.74□□□□□ -1.97
SH3RF3Q8TEJ3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 RNU1-51P-201ENST00000365345 176 ntBASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 Y_RNA.346-201ENST00000365385 112 ntBASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-136P-201ENST00000384663 107 ntBASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-1275P-201ENST00000391087 107 ntBASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 AC080013.2-201ENST00000460866 323 ntBASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 RPS26P55-201ENST00000471178 356 ntBASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 RPL23AP54-201ENST00000495129 419 ntBASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 AC005972.2-201ENST00000604690 348 ntBASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.73□□□□□ -1.97
SH3RF3Q8TEJ3 AL356292.1-201ENST00000283110 373 ntBASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 RNU4-41P-201ENST00000364426 143 ntBASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 Y_RNA.634-201ENST00000364811 113 ntBASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-294P-201ENST00000364999 102 ntBASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 UBL5P3-201ENST00000475112 231 ntBASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-1299P-201ENST00000516316 100 ntBASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 RNA5SP153-201ENST00000516498 76 ntBASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 RNU6-63P-201ENST00000516690 95 ntBASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 RNU7-116P-201ENST00000516940 62 ntBASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 AP001318.4-201ENST00000616637 121 ntBASIC2.72□□□□□ -1.97
SH3RF3Q8TEJ3 Y_RNA.52-201ENST00000362760 96 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 SNORA38-201ENST00000363946 132 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 Y_RNA.328-201ENST00000365208 113 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 MIR221-201ENST00000385135 110 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 MIR891A-201ENST00000401237 79 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 SNORD65B-201ENST00000459126 73 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 SNORD77.4-201ENST00000516158 81 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 AL022345.2-201ENST00000606307 135 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 MIR7843-201ENST00000622274 79 ntBASIC2.71□□□□□ -1.98
SH3RF3Q8TEJ3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 SNORD32B-201ENST00000364460 84 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 RNU6-1131P-201ENST00000364955 107 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 SNORA26.2-201ENST00000390922 122 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 snoU13.15-201ENST00000459407 104 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 AC010531.2-201ENST00000465012 153 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 RNU1-104P-201ENST00000517280 175 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 HSPE1P18-201ENST00000517602 280 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 AL929325.1-201ENST00000603096 117 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 MIR6766-201ENST00000622641 72 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 MIR6873-201ENST00000622788 63 ntBASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SH3RF3Q8TEJ3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms