Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NUP43Q8NFH3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.69□□□□□ -1.98
NUP43Q8NFH3 AC009487.2-201ENST00000420969 6821 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 Y_RNA.35-201ENST00000362601 101 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 SNORD116-21-201ENST00000384507 92 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 MIR548A3-201ENST00000385297 97 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 UBBP3-201ENST00000445497 241 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 RNU1-131P-201ENST00000458943 161 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 Y_RNA.666-201ENST00000516187 112 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 RPL12P50-201ENST00000603116 116 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 AC006023.1-201ENST00000603944 259 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 AL591926.4-201ENST00000616895 298 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.68□□□□□ -1.98
NUP43Q8NFH3 AC096644.4-201ENST00000563417 2912 ntBASIC2.68□□□□□ -1.98
NUP43Q8NFH3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
NUP43Q8NFH3 RNU6-147P-201ENST00000383983 107 ntBASIC2.67□□□□□ -1.98
NUP43Q8NFH3 RPS29P6-201ENST00000438196 145 ntBASIC2.67□□□□□ -1.98
NUP43Q8NFH3 MTATP6P21-201ENST00000440681 189 ntBASIC2.67□□□□□ -1.98
NUP43Q8NFH3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.67□□□□□ -1.98
NUP43Q8NFH3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.67□□□□□ -1.98
NUP43Q8NFH3 RNU1-142P-201ENST00000516682 145 ntBASIC2.67□□□□□ -1.98
NUP43Q8NFH3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NUP43Q8NFH3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.67□□□□□ -1.98
NUP43Q8NFH3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.67□□□□□ -1.98
NUP43Q8NFH3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NUP43Q8NFH3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NUP43Q8NFH3 MIR126-201ENST00000362291 85 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 SNORA1B-201ENST00000362535 133 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 RNU6-443P-201ENST00000384780 107 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 MIR522-201ENST00000385071 87 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 SNORD77.3-201ENST00000391113 65 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 MIR1262-201ENST00000408276 93 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 AL021397.1-201ENST00000451806 248 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 RN7SL636P-201ENST00000497504 294 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.66□□□□□ -1.98
NUP43Q8NFH3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 MIR3616-201ENST00000584070 92 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 AC087685.1-201ENST00000587507 141 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 AC025166.1-201ENST00000612411 163 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 AL121890.5-201ENST00000620848 304 ntBASIC2.66□□□□□ -1.98
NUP43Q8NFH3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
NUP43Q8NFH3 SNORA5B-201ENST00000363786 132 ntBASIC2.65□□□□□ -1.99
NUP43Q8NFH3 Y_RNA.346-201ENST00000365385 112 ntBASIC2.65□□□□□ -1.99
NUP43Q8NFH3 MIR518F-201ENST00000384973 87 ntBASIC2.65□□□□□ -1.99
NUP43Q8NFH3 FTH1P12-201ENST00000432137 551 ntBASIC2.65□□□□□ -1.99
NUP43Q8NFH3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.65□□□□□ -1.99
NUP43Q8NFH3 SCARNA15-202ENST00000516881 127 ntBASIC2.65□□□□□ -1.99
NUP43Q8NFH3 AC091544.4-201ENST00000555268 342 ntBASIC2.65□□□□□ -1.99
NUP43Q8NFH3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.65□□□□□ -1.99
NUP43Q8NFH3 MIR4672-201ENST00000583126 81 ntBASIC2.65□□□□□ -1.99
NUP43Q8NFH3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.65□□□□□ -1.99
NUP43Q8NFH3 MIR376A2-201ENST00000636782 80 ntBASIC2.65□□□□□ -1.99
NUP43Q8NFH3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
NUP43Q8NFH3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
NUP43Q8NFH3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
NUP43Q8NFH3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NUP43Q8NFH3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
NUP43Q8NFH3 MTND5P18-201ENST00000445624 1801 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NUP43Q8NFH3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NUP43Q8NFH3 RNA5SP126-201ENST00000365092 109 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 SNORA8-201ENST00000384574 139 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 SNORA44-201ENST00000384584 132 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 RNU6-160P-201ENST00000384591 107 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.64□□□□□ -1.99
NUP43Q8NFH3 AC107083.1-201ENST00000439643 279 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 SNRPGP13-201ENST00000442212 177 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 Y_RNA.649-201ENST00000459077 103 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 RNU6-693P-201ENST00000516134 107 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 RNU6-1149P-201ENST00000516810 97 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 AP002004.2-201ENST00000531656 154 ntBASIC2.64□□□□□ -1.99
NUP43Q8NFH3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NUP43Q8NFH3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NUP43Q8NFH3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NUP43Q8NFH3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NUP43Q8NFH3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NUP43Q8NFH3 RNU6-880P-201ENST00000384526 107 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 MIR515-2-201ENST00000384883 83 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 MIR515-1-201ENST00000384884 83 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 MIR627-201ENST00000384979 97 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 MIR548A1-201ENST00000385041 97 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 MIR181B1-201ENST00000385240 110 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 RNA5SP323-201ENST00000391094 133 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 SNORA26.7-201ENST00000391288 122 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.63□□□□□ -1.99
NUP43Q8NFH3 AL049830.1-201ENST00000468034 425 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 AL163195.1-201ENST00000496941 348 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 AC024995.1-201ENST00000523014 93 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.63□□□□□ -1.99
NUP43Q8NFH3 ZNF861P-201ENST00000588126 639 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 AL161431.1-201ENST00000618966 4205 ntBASIC2.63□□□□□ -1.99
NUP43Q8NFH3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.62□□□□□ -1.99
NUP43Q8NFH3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.62□□□□□ -1.99
NUP43Q8NFH3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NUP43Q8NFH3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.62□□□□□ -1.99
NUP43Q8NFH3 SNORD88.1-201ENST00000408684 91 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms