Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 MIR4503-201ENST00000582187 83 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 MIR548AY-201ENST00000617669 107 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 U4.1-201ENST00000620349 87 ntBASIC2□□□□□ -2.09
CCDC33Q8N5R6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CCDC33Q8N5R6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC33Q8N5R6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC33Q8N5R6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 RNU6-1048P-201ENST00000364054 107 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.275-201ENST00000364726 110 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 U8.7-201ENST00000364940 136 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.452-201ENST00000384202 108 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 RNU6-463P-201ENST00000384340 107 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 RNU7-34P-201ENST00000459394 64 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.637-201ENST00000459424 114 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 AC024405.2-202ENST00000532731 184 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 POLR3GP1-201ENST00000594073 261 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 AL162424.1-201ENST00000602325 221 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 7SK.10-201ENST00000621414 298 ntBASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.44-201ENST00000362676 108 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 RNU6-414P-201ENST00000363705 104 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 RNU6-662P-201ENST00000384253 104 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.562-201ENST00000384695 113 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 RNU2-38P-201ENST00000410856 79 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 AL161935.2-201ENST00000414627 60 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 STAG3L5P-204ENST00000443759 179 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 AC233266.1-201ENST00000454518 96 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 SNORD127-201ENST00000458892 86 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 RNA5SP182-201ENST00000516064 82 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 RNU7-28P-201ENST00000516759 62 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 AC012433.1-201ENST00000588916 398 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 AP000942.3-201ENST00000603702 160 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 SNORA28-201ENST00000606769 126 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 AC242852.1-201ENST00000612151 96 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 AC021506.2-201ENST00000612354 169 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 AC244015.1-201ENST00000622301 99 ntBASIC1.98□□□□□ -2.09
CCDC33Q8N5R6 AL034345.1-201ENST00000407768 123 ntBASIC1.97□□□□□ -2.09
CCDC33Q8N5R6 JTBP1-201ENST00000441314 247 ntBASIC1.97□□□□□ -2.09
CCDC33Q8N5R6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC33Q8N5R6 AC117454.1-201ENST00000491120 168 ntBASIC1.97□□□□□ -2.09
CCDC33Q8N5R6 OR9P1P-201ENST00000496431 281 ntBASIC1.97□□□□□ -2.09
CCDC33Q8N5R6 Y_RNA.676-201ENST00000516393 96 ntBASIC1.97□□□□□ -2.09
CCDC33Q8N5R6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC33Q8N5R6 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.14-201ENST00000362415 103 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.164-201ENST00000363709 102 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 RNU6-899P-201ENST00000363947 107 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 RNU6-702P-201ENST00000364982 107 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.352-201ENST00000365439 102 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 MIR194-1-201ENST00000384892 85 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 RNA5SP482-201ENST00000391269 118 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 U8.19-201ENST00000459095 133 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 AL049830.1-201ENST00000468034 425 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 MIR3149-201ENST00000584629 83 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 MIR8074-201ENST00000615081 81 ntBASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.193-201ENST00000363979 102 ntBASIC1.95□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.265-201ENST00000364677 108 ntBASIC1.95□□□□□ -2.1
CCDC33Q8N5R6 RNU6-203P-201ENST00000384038 104 ntBASIC1.95□□□□□ -2.1
CCDC33Q8N5R6 RNU6-574P-201ENST00000384265 107 ntBASIC1.95□□□□□ -2.1
CCDC33Q8N5R6 AC005357.1-201ENST00000588399 301 ntBASIC1.95□□□□□ -2.1
CCDC33Q8N5R6 AL008718.3-201ENST00000610217 321 ntBASIC1.95□□□□□ -2.1
CCDC33Q8N5R6 AC013791.1-201ENST00000616619 62 ntBASIC1.95□□□□□ -2.1
CCDC33Q8N5R6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC33Q8N5R6 AC134026.1-201ENST00000623249 2239 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 RNU6-740P-201ENST00000364734 105 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 MTCO2P33-201ENST00000402100 465 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 MIR1267-201ENST00000408723 78 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 SNORA36B-201ENST00000410438 131 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 BTF3P11-201ENST00000426582 477 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 AC108667.1-201ENST00000428618 249 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 RNU6-1132P-201ENST00000459214 107 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 RPL23AP54-201ENST00000495129 419 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 SNORA44.1-201ENST00000517031 108 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 AC004817.2-201ENST00000561794 651 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 SNORA77B-201ENST00000578179 125 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 AC062037.2-201ENST00000610137 73 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 MIR8081-201ENST00000611533 95 ntBASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.82-201ENST00000363000 102 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.92-201ENST00000363043 102 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 RNU6-674P-201ENST00000363831 107 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.235-201ENST00000364412 102 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 RNU4-41P-201ENST00000364426 143 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.306-201ENST00000365015 102 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.312-201ENST00000365089 102 ntBASIC1.93□□□□□ -2.1
CCDC33Q8N5R6 Y_RNA.322-201ENST00000365151 102 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms