Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
BEST3Q8N1M1 UBE2WP1-201ENST00000362030 340 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 SNORA72.4-201ENST00000384174 132 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 SNORA72-201ENST00000384339 132 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 U8.19-201ENST00000459095 133 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 SNORA31.10-201ENST00000516482 106 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 RNU7-28P-201ENST00000516759 62 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 RNU2-56P-201ENST00000516826 190 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.65□□□□□ -2.15
BEST3Q8N1M1 AC011604.1-201ENST00000545978 196 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
BEST3Q8N1M1 POLR3GP1-201ENST00000594073 261 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 AP003357.1-201ENST00000604497 148 ntBASIC1.65□□□□□ -2.15
BEST3Q8N1M1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
BEST3Q8N1M1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
BEST3Q8N1M1 RNU6-414P-201ENST00000363705 104 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 SNORA16.1-201ENST00000364597 132 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 RNA5SP190-201ENST00000365222 118 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 RNU6-463P-201ENST00000384340 107 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 AL034345.1-201ENST00000407768 123 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 AL603825.1-201ENST00000438481 80 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 AC104332.1-201ENST00000440471 797 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.64□□□□□ -2.15
BEST3Q8N1M1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.64□□□□□ -2.15
BEST3Q8N1M1 RNU7-115P-201ENST00000516433 55 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 RNU6-250P-201ENST00000516958 103 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 AL929325.1-201ENST00000603096 117 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.64□□□□□ -2.15
BEST3Q8N1M1 7SK.10-201ENST00000621414 298 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.64□□□□□ -2.15
BEST3Q8N1M1 SNORA1B-201ENST00000362535 133 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.44-201ENST00000362676 108 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.144-201ENST00000363521 113 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 RNU6-899P-201ENST00000363947 107 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 U8.7-201ENST00000364940 136 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 SNORD127-201ENST00000458892 86 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 SNORD13-201ENST00000459299 104 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 RNU7-34P-201ENST00000459394 64 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 AL049830.1-201ENST00000468034 425 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 AC117454.1-201ENST00000491120 168 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 SNORA44.1-201ENST00000517031 108 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 AC024405.2-202ENST00000532731 184 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 MIR4503-201ENST00000582187 83 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 AC103810.8-201ENST00000607347 118 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 MIR548AY-201ENST00000617669 107 ntBASIC1.63□□□□□ -2.15
BEST3Q8N1M1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
BEST3Q8N1M1 RNU6-1272P-201ENST00000362776 107 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.217-201ENST00000364214 105 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.275-201ENST00000364726 110 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.452-201ENST00000384202 108 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 RNU6-662P-201ENST00000384253 104 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 RNU6-763P-201ENST00000390865 106 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 SNORA26.5-201ENST00000391215 123 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 RNA5SP482-201ENST00000391269 118 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 RNU2-14P-201ENST00000411053 191 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.62□□□□□ -2.15
BEST3Q8N1M1 RNU7-141P-201ENST00000459304 62 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.641-201ENST00000459414 105 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.668-201ENST00000516233 93 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 AC127455.1-201ENST00000565496 145 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 MIR3683-201ENST00000580847 82 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 MIR8074-201ENST00000615081 81 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 U2.14-201ENST00000615943 113 ntBASIC1.62□□□□□ -2.15
BEST3Q8N1M1 RNU6-702P-201ENST00000364982 107 ntBASIC1.61□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.352-201ENST00000365439 102 ntBASIC1.61□□□□□ -2.15
BEST3Q8N1M1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
BEST3Q8N1M1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.61□□□□□ -2.15
BEST3Q8N1M1 JTBP1-201ENST00000441314 247 ntBASIC1.61□□□□□ -2.15
BEST3Q8N1M1 STAG3L5P-204ENST00000443759 179 ntBASIC1.61□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.637-201ENST00000459424 114 ntBASIC1.61□□□□□ -2.15
BEST3Q8N1M1 MIR3149-201ENST00000584629 83 ntBASIC1.61□□□□□ -2.15
BEST3Q8N1M1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.61□□□□□ -2.15
BEST3Q8N1M1 AP000942.3-201ENST00000603702 160 ntBASIC1.61□□□□□ -2.15
BEST3Q8N1M1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
BEST3Q8N1M1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.14-201ENST00000362415 103 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 Y_RNA.193-201ENST00000363979 102 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 RNU6-1048P-201ENST00000364054 107 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 RNU6-144P-201ENST00000383951 107 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 MIR30A-201ENST00000385092 71 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 SNORA17.3-201ENST00000391159 129 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 MTCO2P33-201ENST00000402100 465 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 MIR1267-201ENST00000408723 78 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 MIR548H3-201ENST00000408771 118 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 RNU2-38P-201ENST00000410856 79 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.6□□□□□ -2.15
BEST3Q8N1M1 RNU6-1132P-201ENST00000459214 107 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 RPL23AP54-201ENST00000495129 419 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.6□□□□□ -2.15
BEST3Q8N1M1 AC012433.1-201ENST00000588916 398 ntBASIC1.6□□□□□ -2.15
BEST3Q8N1M1 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 291.1 ms