Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 MIR5002-201ENST00000584713 97 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 AC104465.1-201ENST00000611365 139 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 AC021753.1-201ENST00000635724 168 ntBASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.1□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.8-201ENST00000362353 102 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 RNU4-41P-201ENST00000364426 143 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-1080P-201ENST00000383982 107 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.412-201ENST00000384001 104 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 RNU6-482P-201ENST00000391068 107 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 RNA5SP181-201ENST00000410246 98 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 RNA5SP270-201ENST00000411361 118 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 Y_RNA.797-201ENST00000515977 94 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 RN7SKP164-201ENST00000516138 266 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 AL353997.5-201ENST00000618886 171 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 MIR6079-201ENST00000635807 62 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 U6.106-201ENST00000636360 105 ntBASIC2.09□□□□□ -2.07
SFTPA1Q8IWL2 AP006437.1-201ENST00000641440 3685 ntBASIC2.09□□□□□ -2.08
SFTPA1Q8IWL2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 AC018630.2-201ENST00000534866 2403 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 SNORA3A-201ENST00000364113 130 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 Y_RNA.240-201ENST00000364469 95 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-187P-201ENST00000384139 106 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-804P-201ENST00000384286 107 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 MIR520G-201ENST00000385064 90 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 HMGN2P39-201ENST00000398005 273 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 MIR548M-201ENST00000408260 86 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 MIR1283-2-201ENST00000408621 87 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 RNU5E-9P-201ENST00000411164 104 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 MRPS18CP4-201ENST00000535821 231 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 MIR5094-201ENST00000578766 85 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 MIR4744-201ENST00000581563 82 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 AC091178.2-201ENST00000584401 117 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 AC005786.1-201ENST00000588553 154 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 ZNF271P-202ENST00000465539 1970 ntBASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SFTPA1Q8IWL2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 Y_RNA.121-201ENST00000363309 113 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 Y_RNA.203-201ENST00000364106 102 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 Y_RNA.464-201ENST00000384282 110 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 MIR515-2-201ENST00000384883 83 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 MIR515-1-201ENST00000384884 83 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 MIR616-201ENST00000385293 97 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 RNU4-61P-201ENST00000411243 107 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 AC003989.2-201ENST00000440224 169 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 MTND5P41-201ENST00000517498 206 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 MIR3133-201ENST00000583157 78 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 AC100821.1-201ENST00000523153 2479 ntBASIC2.07□□□□□ -2.08
SFTPA1Q8IWL2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-674P-201ENST00000363831 107 ntBASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 RNU1-52P-201ENST00000384190 164 ntBASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 SNORA40.18-201ENST00000391200 128 ntBASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 AC024995.1-201ENST00000523014 93 ntBASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 RPL23AP91-201ENST00000569211 455 ntBASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 AC108706.1-201ENST00000611053 297 ntBASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.06□□□□□ -2.08
SFTPA1Q8IWL2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-103P-201ENST00000363686 107 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 Y_RNA.170-201ENST00000363746 110 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-578P-201ENST00000390980 103 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 RNA5SP109-201ENST00000391010 116 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 AL606845.1-201ENST00000404881 255 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 AL606517.2-201ENST00000442855 241 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 RPS26P45-201ENST00000471748 340 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 RNVU1-2-201ENST00000516326 135 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 MIR5688-201ENST00000580619 83 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 AL049861.1-201ENST00000603130 150 ntBASIC2.05□□□□□ -2.08
SFTPA1Q8IWL2 SNORA1B-201ENST00000362535 133 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 Y_RNA.75-201ENST00000362927 97 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNU1-17P-201ENST00000363022 152 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-1209P-201ENST00000363655 107 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 Y_RNA.398-201ENST00000383952 99 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 Y_RNA.506-201ENST00000384494 102 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-125P-201ENST00000384505 107 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNA5SP465-201ENST00000391195 109 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 Y_RNA.587-201ENST00000391210 103 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNU11-5P-201ENST00000391216 129 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-1135P-201ENST00000411083 103 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 HMGN2P35-201ENST00000412164 270 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 SEPT7P4-201ENST00000437076 306 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-561P-201ENST00000516222 102 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-346P-201ENST00000516288 111 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNU7-193P-201ENST00000516723 65 ntBASIC2.04□□□□□ -2.08
SFTPA1Q8IWL2 RNU6-341P-201ENST00000516973 96 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 330 ms