Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.71□□□□□ -1.82
LAPTM4BQ86VI4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
LAPTM4BQ86VI4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LAPTM4BQ86VI4 AL442644.1-201ENST00000454390 3105 ntBASIC3.71□□□□□ -1.82
LAPTM4BQ86VI4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 SNORA1.2-201ENST00000365189 134 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 Y_RNA.370-201ENST00000365589 108 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 RNU6-519P-201ENST00000410590 108 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 CYCSP35-201ENST00000451978 304 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 RN7SL323P-201ENST00000494712 295 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 RNU6-667P-201ENST00000517186 102 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 RNU1-45P-201ENST00000517191 141 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 AC020891.4-201ENST00000605745 93 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 MIR7157-201ENST00000635801 60 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 MIR7515-201ENST00000637837 67 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 IPO8P1-201ENST00000455509 3109 ntBASIC3.7□□□□□ -1.82
LAPTM4BQ86VI4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 Y_RNA.448-201ENST00000384185 108 ntBASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 MIR592-201ENST00000384959 97 ntBASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 MIR181B2-201ENST00000385004 89 ntBASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 MIR95-201ENST00000385072 81 ntBASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 SNORA48.11-201ENST00000517015 89 ntBASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 SNORD3E-202ENST00000627253 216 ntBASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LAPTM4BQ86VI4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 PWAR6-201ENST00000552334 4618 ntBASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 Y_RNA.168-201ENST00000363740 102 ntBASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 MIR1251-201ENST00000408552 70 ntBASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 SNORA71B-202ENST00000439232 272 ntBASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 MIR3134-201ENST00000579433 74 ntBASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 AC110079.1-202ENST00000635213 138 ntBASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.68□□□□□ -1.82
LAPTM4BQ86VI4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 MIRLET7C-201ENST00000362160 84 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 RNU4-32P-201ENST00000363404 141 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 RNA5SP138-201ENST00000365098 114 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 RNU6-342P-201ENST00000384521 104 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 MIR554-201ENST00000384874 96 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 SNORA48.7-201ENST00000391302 135 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 MIR1236-201ENST00000408340 102 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 MICF-203ENST00000432679 129 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 RPS29P29-201ENST00000456396 171 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 MTND5P40-201ENST00000559945 246 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 AL355297.2-201ENST00000604792 129 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 AC027279.3-201ENST00000625055 122 ntBASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
LAPTM4BQ86VI4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 RNA5SP97-201ENST00000365006 84 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 MIR516B2-201ENST00000385190 85 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 SNORA3.3-201ENST00000408712 125 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 AC083863.1-201ENST00000438811 231 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 AC245047.7-201ENST00000440265 293 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 RN7SL93P-201ENST00000463035 293 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 SNORA67.7-201ENST00000516664 135 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 CYCSP30-201ENST00000546447 172 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 MIR3158-1-201ENST00000583596 81 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 AL356280.1-201ENST00000603614 379 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 AL121772.2-201ENST00000614331 297 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 AC012676.2-201ENST00000619258 186 ntBASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LAPTM4BQ86VI4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LAPTM4BQ86VI4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LAPTM4BQ86VI4 RNU6-913P-201ENST00000390913 95 ntBASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 SCARNA18B-201ENST00000458806 135 ntBASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 AC234781.5-201ENST00000508429 271 ntBASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 SCARNA14-201ENST00000516903 136 ntBASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 AC005000.2-201ENST00000605468 310 ntBASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 AL020996.3-201ENST00000606617 222 ntBASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 SNORA28-201ENST00000606769 126 ntBASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 MIR8054-201ENST00000620877 86 ntBASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 AC034229.5-201ENST00000624258 185 ntBASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 AC244205.2-202ENST00000635781 342 ntBASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LAPTM4BQ86VI4 AL359837.1-201ENST00000381357 287 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms