Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 RNA5SP109-201ENST00000391010 116 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 RNU6-482P-201ENST00000391068 107 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
DDX53Q86TM3 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.51□□□□□ -2.01
DDX53Q86TM3 RPL23AP91-201ENST00000569211 455 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 AC022217.4-201ENST00000604389 163 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 AC108706.1-201ENST00000611053 297 ntBASIC2.51□□□□□ -2.01
DDX53Q86TM3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
DDX53Q86TM3 MIR6073-201ENST00000352083 89 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 SNORA1B-201ENST00000362535 133 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 RNA5SP496-201ENST00000391240 109 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 AL512604.1-201ENST00000404812 257 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 AL606845.1-201ENST00000404881 255 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 RNA5SP247-201ENST00000411181 105 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 AC245047.4-201ENST00000433189 144 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 AC108210.2-201ENST00000503681 201 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.5□□□□□ -2.01
DDX53Q86TM3 SNORA31.25-201ENST00000517242 134 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX53Q86TM3 MIR2681-201ENST00000581814 105 ntBASIC2.5□□□□□ -2.01
DDX53Q86TM3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
DDX53Q86TM3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
DDX53Q86TM3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.49□□□□□ -2.01
DDX53Q86TM3 RNU6-275P-201ENST00000364910 107 ntBASIC2.49□□□□□ -2.01
DDX53Q86TM3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.49□□□□□ -2.01
DDX53Q86TM3 MIR562-201ENST00000384894 95 ntBASIC2.49□□□□□ -2.01
DDX53Q86TM3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
DDX53Q86TM3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
DDX53Q86TM3 RNA5SP501-201ENST00000410990 112 ntBASIC2.49□□□□□ -2.01
DDX53Q86TM3 RN7SKP101-201ENST00000411376 320 ntBASIC2.49□□□□□ -2.01
DDX53Q86TM3 AC109810.1-201ENST00000534066 224 ntBASIC2.49□□□□□ -2.01
DDX53Q86TM3 AL049861.1-201ENST00000603130 150 ntBASIC2.49□□□□□ -2.01
DDX53Q86TM3 AC067747.1-201ENST00000608026 250 ntBASIC2.49□□□□□ -2.01
DDX53Q86TM3 Z82195.2-201ENST00000612348 18351 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 AC131280.1-202ENST00000624067 4211 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 SNORA67.1-201ENST00000364749 141 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 DEFA7P-201ENST00000382676 285 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 SNORA48.1-201ENST00000390879 135 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 RNU6-1228P-201ENST00000391014 107 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 AC245047.3-201ENST00000429428 127 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 AL591806.2-201ENST00000433122 173 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 RPS27P1-201ENST00000450552 247 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 RNU2-56P-201ENST00000516826 190 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 AL358944.1-201ENST00000528537 144 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 AP002004.2-201ENST00000531656 154 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 AL021707.8-201ENST00000609428 183 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 JPX_2.1-201ENST00000614161 69 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 AC245884.12-201ENST00000615364 59 ntBASIC2.48□□□□□ -2.01
DDX53Q86TM3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
DDX53Q86TM3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
DDX53Q86TM3 Y_RNA.23-201ENST00000362496 106 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 SNORD114-1-201ENST00000362705 72 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 Y_RNA.253-201ENST00000364562 112 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 RNU1-138P-201ENST00000384093 164 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 Y_RNA.464-201ENST00000384282 110 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 MIR764-201ENST00000390811 85 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 RNA5SP450-201ENST00000411206 102 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 SEPT7P4-201ENST00000437076 306 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 AL049830.1-201ENST00000468034 425 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 RNU6-561P-201ENST00000516222 102 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 RNU6-548P-201ENST00000517083 115 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.47□□□□□ -2.01
DDX53Q86TM3 MIR4529-201ENST00000578110 78 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.47□□□□□ -2.01
DDX53Q86TM3 AC104465.1-201ENST00000611365 139 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 MIR6873-201ENST00000622788 63 ntBASIC2.47□□□□□ -2.01
DDX53Q86TM3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
DDX53Q86TM3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
DDX53Q86TM3 RNU6-312P-201ENST00000364629 107 ntBASIC2.46□□□□□ -2.02
DDX53Q86TM3 MIR1289-2-201ENST00000408360 111 ntBASIC2.46□□□□□ -2.02
DDX53Q86TM3 AL121914.1-201ENST00000450188 156 ntBASIC2.46□□□□□ -2.02
DDX53Q86TM3 SNORD11-201ENST00000459124 84 ntBASIC2.46□□□□□ -2.02
DDX53Q86TM3 HMGN1P7-201ENST00000491722 313 ntBASIC2.46□□□□□ -2.02
DDX53Q86TM3 AL049779.4-201ENST00000604500 156 ntBASIC2.46□□□□□ -2.02
DDX53Q86TM3 FO624990.1-201ENST00000636373 85 ntBASIC2.46□□□□□ -2.02
DDX53Q86TM3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
DDX53Q86TM3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
DDX53Q86TM3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
DDX53Q86TM3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
DDX53Q86TM3 AC092881.1-201ENST00000638218 2733 ntBASIC2.46□□□□□ -2.02
DDX53Q86TM3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
DDX53Q86TM3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
DDX53Q86TM3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.45□□□□□ -2.02
DDX53Q86TM3 AC069257.2-201ENST00000441819 155 ntBASIC2.45□□□□□ -2.02
DDX53Q86TM3 AC007336.1-201ENST00000576365 3828 ntBASIC2.45□□□□□ -2.02
DDX53Q86TM3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.45□□□□□ -2.02
DDX53Q86TM3 AL591926.4-201ENST00000616895 298 ntBASIC2.45□□□□□ -2.02
DDX53Q86TM3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.44□□□□□ -2.02
DDX53Q86TM3 MIR126-201ENST00000362291 85 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 RNU6-728P-201ENST00000365375 104 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 RNY3P5-201ENST00000384127 102 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 RNU6-804P-201ENST00000384286 107 ntBASIC2.44□□□□□ -2.02
DDX53Q86TM3 MIR15B-201ENST00000385045 98 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 225.6 ms