Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.49-201ENST00000362714 112 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-1264P-201ENST00000383891 107 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 RNU1-73P-201ENST00000383971 164 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.437-201ENST00000384113 113 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 MIR627-201ENST00000384979 97 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 SNORA36B-201ENST00000410438 131 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 AL356320.1-201ENST00000429616 163 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 GPM6BP3-201ENST00000442797 145 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 COX6CP6-201ENST00000490840 228 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-830P-201ENST00000516353 107 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 AC141557.1-201ENST00000540982 400 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 AL160236.1-201ENST00000556317 195 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 MIR1273D-201ENST00000577266 86 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 AC097639.2-201ENST00000603159 172 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 MIR2052-201ENST00000636055 55 ntBASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
BHLHA9Q7RTU4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-219P-201ENST00000364728 107 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 SNORD18B-201ENST00000365659 72 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-140P-201ENST00000384566 108 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 SNORA26.3-201ENST00000391119 136 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 RNA5SP492-201ENST00000411330 114 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 SEM1P1-201ENST00000506694 209 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 MRPS36P2-201ENST00000512569 299 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 SNORA70.12-201ENST00000516084 153 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 RNU7-115P-201ENST00000516433 55 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 AC103810.1-201ENST00000579873 453 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 AC025754.2-201ENST00000606491 432 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 IGLL4P-201ENST00000614590 133 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 MIR548AY-201ENST00000617669 107 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 MIR3529-201ENST00000637713 78 ntBASIC2.31□□□□□ -2.04
BHLHA9Q7RTU4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 AL589743.1-201ENST00000551932 2712 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 SNORD87-201ENST00000364849 89 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 RNU1-133P-201ENST00000364867 167 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.344-201ENST00000365381 112 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 U3.37-201ENST00000408528 213 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 RN7SKP61-201ENST00000410642 295 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 RNA5SP136-201ENST00000410906 107 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 HMGN2P35-201ENST00000412164 270 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 AC098614.2-201ENST00000426040 255 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 SNORA31.16-201ENST00000516773 139 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 IGKV3-31-201ENST00000523109 329 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 HMGN2P15-201ENST00000585707 270 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 MIR4662A-201ENST00000637499 67 ntBASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
BHLHA9Q7RTU4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 RNU1-62P-201ENST00000362599 164 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.94-201ENST00000363068 106 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.124-201ENST00000363339 93 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-1229P-201ENST00000364295 107 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 SNORA4.2-201ENST00000365313 147 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.432-201ENST00000384087 111 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-242P-201ENST00000384359 107 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 SNORD116-13-201ENST00000384408 92 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 AL139095.1-201ENST00000404326 391 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-402P-201ENST00000410678 103 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 SNRPGP7-201ENST00000469016 106 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 AC007751.1-201ENST00000529260 376 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 MIR548Z-201ENST00000584743 97 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 AC136601.2-201ENST00000604356 474 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 AL356157.2-201ENST00000605122 111 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 FTX_3.1-201ENST00000610451 147 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
BHLHA9Q7RTU4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 SNORD56.1-201ENST00000362913 68 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 SNORD115-13-201ENST00000363358 82 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 SNORD115-16-201ENST00000363887 82 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.245-201ENST00000364493 95 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 Y_RNA.634-201ENST00000364811 113 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 SNORD115-1-201ENST00000364961 82 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 MIR544A-201ENST00000384855 91 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 MIR624-201ENST00000385217 97 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 RNA5SP425-201ENST00000410336 112 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 AC012306.1-201ENST00000423267 114 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 TRBV12-1-201ENST00000479785 344 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 AC016632.1-201ENST00000503994 196 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 RNU6-162P-201ENST00000516228 103 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 AL049861.1-201ENST00000603130 150 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 AP003357.1-201ENST00000604497 148 ntBASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.28□□□□□ -2.04
BHLHA9Q7RTU4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 263.6 ms