Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 SNORA25.1-201ENST00000362326 128 ntBASIC1.86□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.237-201ENST00000364439 102 ntBASIC1.86□□□□□ -2.11
SYNE3Q6ZMZ3 SNORA72-201ENST00000384339 132 ntBASIC1.86□□□□□ -2.11
SYNE3Q6ZMZ3 RNU6-440P-201ENST00000390882 105 ntBASIC1.86□□□□□ -2.11
SYNE3Q6ZMZ3 FTH1P12-201ENST00000432137 551 ntBASIC1.86□□□□□ -2.11
SYNE3Q6ZMZ3 RNA5SP57-201ENST00000459463 123 ntBASIC1.86□□□□□ -2.11
SYNE3Q6ZMZ3 RNU7-115P-201ENST00000516433 55 ntBASIC1.86□□□□□ -2.11
SYNE3Q6ZMZ3 SNORA27.4-201ENST00000516650 95 ntBASIC1.86□□□□□ -2.11
SYNE3Q6ZMZ3 AL162424.1-201ENST00000602325 221 ntBASIC1.86□□□□□ -2.11
SYNE3Q6ZMZ3 U2.14-201ENST00000615943 113 ntBASIC1.86□□□□□ -2.11
SYNE3Q6ZMZ3 SNORA1B-201ENST00000362535 133 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 RNU6-1272P-201ENST00000362776 107 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 Y_RNA.275-201ENST00000364726 110 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 SNORA26.5-201ENST00000391215 123 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 RN7SKP200-201ENST00000410564 320 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 RNU2-7P-201ENST00000410794 178 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 RNU7-28P-201ENST00000516759 62 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 DEFB108E-201ENST00000524692 240 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 AC127455.1-201ENST00000565496 145 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.85□□□□□ -2.11
SYNE3Q6ZMZ3 AL391987.6-201ENST00000305671 199 ntBASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 MIR1302-3-201ENST00000408128 138 ntBASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 JTBP1-201ENST00000441314 247 ntBASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 U8.19-201ENST00000459095 133 ntBASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 MIR4709-201ENST00000577272 72 ntBASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 SNORD53B-201ENST00000577887 78 ntBASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 MIR4285-201ENST00000581001 85 ntBASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 AL929325.1-201ENST00000603096 117 ntBASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 BX248123.2-201ENST00000606318 124 ntBASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 MIR548AY-201ENST00000617669 107 ntBASIC1.84□□□□□ -2.11
SYNE3Q6ZMZ3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SYNE3Q6ZMZ3 AP000648.3-201ENST00000623539 4507 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-439P-201ENST00000384188 106 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.452-201ENST00000384202 108 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-514P-201ENST00000384208 107 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-997P-201ENST00000384725 107 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 RNU2-14P-201ENST00000411053 191 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 SNORD13-201ENST00000459299 104 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.637-201ENST00000459424 114 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 AC023790.1-201ENST00000482174 347 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 OR9P1P-201ENST00000496431 281 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-970P-201ENST00000516312 107 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 SNORA77B-201ENST00000578179 125 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 SNORA28-201ENST00000606769 126 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 AC021506.2-201ENST00000612354 169 ntBASIC1.83□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.144-201ENST00000363521 113 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 RNU4-13P-201ENST00000364019 141 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-463P-201ENST00000384340 107 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 MIR517C-201ENST00000385103 95 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-763P-201ENST00000390865 106 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 MIR934-201ENST00000401241 83 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 SNORD2.1-201ENST00000458762 69 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 SNORD127-201ENST00000458892 86 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 RNU7-141P-201ENST00000459304 62 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 AC008834.1-201ENST00000511612 175 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 AC024405.2-202ENST00000532731 184 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 AC011604.1-201ENST00000545978 196 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 MIR3198-2-201ENST00000577868 80 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 MIR4762-201ENST00000585261 75 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 AL353997.5-201ENST00000618886 171 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 U4.1-201ENST00000620349 87 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 AC068647.2-201ENST00000637380 353 ntBASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SYNE3Q6ZMZ3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.44-201ENST00000362676 108 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.82-201ENST00000363000 102 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.92-201ENST00000363043 102 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.235-201ENST00000364412 102 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 U8.5-201ENST00000364528 136 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.288-201ENST00000364854 92 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 U8.7-201ENST00000364940 136 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.306-201ENST00000365015 102 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.312-201ENST00000365089 102 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.322-201ENST00000365151 102 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.352-201ENST00000365439 102 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 RNU6-969P-201ENST00000383900 105 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 RNA5SP482-201ENST00000391269 118 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 AL034345.1-201ENST00000407768 123 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 COX6CP10-201ENST00000416832 224 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.650-201ENST00000459002 102 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 RNU2-56P-201ENST00000516826 190 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.777-201ENST00000516982 102 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 MIR4503-201ENST00000582187 83 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 AL512605.2-201ENST00000592972 256 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.771-201ENST00000598668 102 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 MIR8074-201ENST00000615081 81 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 7SK.10-201ENST00000621414 298 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 AL513423.1-201ENST00000621695 132 ntBASIC1.81□□□□□ -2.12
SYNE3Q6ZMZ3 Y_RNA.789-201ENST00000622480 102 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms