Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.94□□□□□ -1.78
TRAF7Q6Q0C0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 SNORD38.1-201ENST00000363863 68 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 RNA5SP139-201ENST00000364340 117 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 Y_RNA.547-201ENST00000384654 119 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 Y_RNA.567-201ENST00000384736 106 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 Y_RNA.621-201ENST00000411065 96 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 snoU13.11-201ENST00000459219 104 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 SNORA18.7-201ENST00000516910 131 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 RNU6-1258P-201ENST00000516911 111 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 AL353149.1-201ENST00000610667 244 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 MIR7112-201ENST00000616126 65 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 UCA1.1-201ENST00000620952 75 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 MIR8057-201ENST00000620957 69 ntBASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
TRAF7Q6Q0C0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 RNA5SP322-201ENST00000363617 119 ntBASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 Y_RNA.171-201ENST00000363760 102 ntBASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 Y_RNA.242-201ENST00000364473 110 ntBASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 RNU1-89P-201ENST00000384592 164 ntBASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 SNORD77B-201ENST00000391112 67 ntBASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 SNORA11.2-201ENST00000408318 127 ntBASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 RNU6-1096P-201ENST00000517089 102 ntBASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAF7Q6Q0C0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 RNU6-1241P-201ENST00000384536 107 ntBASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 MIR128-1-201ENST00000384921 82 ntBASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 RNU6-1108P-201ENST00000516308 104 ntBASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 RNU6-807P-201ENST00000516805 107 ntBASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 MIR7851-201ENST00000610611 160 ntBASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.91□□□□□ -1.78
TRAF7Q6Q0C0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
TRAF7Q6Q0C0 AP003122.5-201ENST00000527668 3766 ntBASIC3.9□□□□□ -1.78
TRAF7Q6Q0C0 MIR342-201ENST00000362212 99 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 RNU6-829P-201ENST00000363700 112 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 MIR635-201ENST00000384830 98 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 RNU6-630P-201ENST00000391258 106 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 AL445646.1-201ENST00000431784 216 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 RPS29P21-201ENST00000496272 170 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 AP003484.1-201ENST00000530974 250 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 MIR548AE2-201ENST00000583456 67 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 AC006441.5-201ENST00000612680 209 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 U4.6-201ENST00000621618 127 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 MIR7978-201ENST00000636158 59 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 MIR1297-201ENST00000637311 77 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 AC092881.1-201ENST00000638218 2733 ntBASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRAF7Q6Q0C0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 SNORD115-2-201ENST00000362842 82 ntBASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 SNORD115-20-201ENST00000365099 82 ntBASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 RNU6-519P-201ENST00000410590 108 ntBASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 SNX2P2-201ENST00000424553 323 ntBASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 Y_RNA.722-201ENST00000517279 114 ntBASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 AC021613.1-201ENST00000623880 111 ntBASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 AC110079.1-202ENST00000635213 138 ntBASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAF7Q6Q0C0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRAF7Q6Q0C0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRAF7Q6Q0C0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRAF7Q6Q0C0 Y_RNA.470-201ENST00000384307 117 ntBASIC3.88□□□□□ -1.79
TRAF7Q6Q0C0 MIR634-201ENST00000385208 97 ntBASIC3.88□□□□□ -1.79
TRAF7Q6Q0C0 Z98941.1-201ENST00000407764 100 ntBASIC3.88□□□□□ -1.79
TRAF7Q6Q0C0 AC016909.1-201ENST00000415916 166 ntBASIC3.88□□□□□ -1.79
TRAF7Q6Q0C0 AC110620.1-201ENST00000416042 228 ntBASIC3.88□□□□□ -1.79
TRAF7Q6Q0C0 RNU7-113P-201ENST00000459273 62 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms