Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RNU4-16P-201ENST00000364737 141 ntBASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 Y_RNA.377-201ENST00000365644 108 ntBASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 SNORA27-201ENST00000384323 126 ntBASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 AL512326.2-201ENST00000426359 151 ntBASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 ATP5J2P3-201ENST00000451550 258 ntBASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 RNU7-171P-201ENST00000459581 62 ntBASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 TRBV12-2-201ENST00000489763 344 ntBASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 RNU6-521P-201ENST00000516663 105 ntBASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 MIR5588-201ENST00000581890 63 ntBASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 AC064859.1-201ENST00000624741 174 ntBASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.57□□□□□ -1.84
PTCRAQ6ISU1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 Y_RNA.73-201ENST00000362910 113 ntBASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 SRIP3-201ENST00000413200 219 ntBASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 RNU6-1018P-201ENST00000516577 106 ntBASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 Y_RNA.705-201ENST00000516862 110 ntBASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 MIR4727-201ENST00000622232 55 ntBASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTCRAQ6ISU1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 MIR342-201ENST00000362212 99 ntBASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 RNU6-787P-201ENST00000384032 107 ntBASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 MIR605-201ENST00000385078 83 ntBASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 RNU4-69P-201ENST00000410677 143 ntBASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 SNX2P2-201ENST00000424553 323 ntBASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 SEM1P1-201ENST00000506694 209 ntBASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 RNU6-998P-201ENST00000515894 101 ntBASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 MIR4777-201ENST00000583710 86 ntBASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 AC021613.1-201ENST00000623880 111 ntBASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PTCRAQ6ISU1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 Y_RNA.99-201ENST00000363138 105 ntBASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 RNU6-402P-201ENST00000410678 103 ntBASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 HMGN2P7-201ENST00000456186 273 ntBASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 RN7SL297P-201ENST00000483161 293 ntBASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 SNORD59.2-201ENST00000516873 68 ntBASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 AL355297.2-201ENST00000604792 129 ntBASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 uc_338.32-201ENST00000615087 172 ntBASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 MFSD8-233ENST00000641482 4860 ntBASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PTCRAQ6ISU1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 Y_RNA.95-201ENST00000363079 95 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 RNA5SP322-201ENST00000363617 119 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 SNORD115-35-201ENST00000365122 82 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 RNU6-24P-201ENST00000384440 107 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 RNU6-887P-201ENST00000410660 100 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 RPL32P35-201ENST00000415214 394 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 BTF3P4-201ENST00000418852 495 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 RPL23AP63-201ENST00000498752 471 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 AC019288.1-201ENST00000557918 224 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 ZNF861P-201ENST00000588126 639 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 AC095038.3-201ENST00000634439 195 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 AL356274.2-201ENST00000624379 3752 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.53□□□□□ -1.84
PTCRAQ6ISU1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-34-201ENST00000362441 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-12-201ENST00000362583 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-29-201ENST00000362834 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-9-201ENST00000362912 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-21-201ENST00000362963 81 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-14-201ENST00000363090 81 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-13-201ENST00000363358 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-41-201ENST00000363608 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-11-201ENST00000363616 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-5-201ENST00000363633 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-39-201ENST00000363694 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-4-201ENST00000363810 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-16-201ENST00000363887 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-6-201ENST00000363942 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 Y_RNA.190-201ENST00000363964 101 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-42-201ENST00000364273 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 Y_RNA.241-201ENST00000364470 117 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORA68.1-201ENST00000364537 132 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-15-201ENST00000364809 81 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-1-201ENST00000364961 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-26-201ENST00000365067 82 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-10-201ENST00000365073 81 ntBASIC3.52□□□□□ -1.85
PTCRAQ6ISU1 SNORD115-43-201ENST00000365503 82 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms