Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNU6-888P-201ENST00000363010 101 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNU6-647P-201ENST00000364243 107 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 MIR548A2-201ENST00000384956 97 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 SNORA26.7-201ENST00000391288 122 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 CST2P1-201ENST00000425770 87 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 FTH1P12-201ENST00000432137 551 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 AL049873.1-201ENST00000480540 376 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 Y_RNA.709-201ENST00000516952 92 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC024995.1-201ENST00000523014 93 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 AP002004.2-201ENST00000531656 154 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC007536.1-201ENST00000533382 349 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 U4atac.1-201ENST00000618345 95 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 AL161431.1-201ENST00000618966 4205 ntBASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DQA1Q5Y7H0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC080100.1-201ENST00000624239 5356 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 SNORD24-201ENST00000383884 75 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 AL139132.1-201ENST00000431587 344 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC087499.2-201ENST00000432861 149 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 AF228730.3-201ENST00000436691 102 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 AL606517.2-201ENST00000442855 241 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC104389.3-201ENST00000445629 235 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNU7-94P-201ENST00000459576 63 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 Y_RNA.714-201ENST00000517065 90 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC091544.4-201ENST00000555268 342 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 ZNF861P-201ENST00000588126 639 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC006386.2-201ENST00000624491 75 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC012005.1-201ENST00000624575 75 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 ICE2P2-201ENST00000483823 2787 ntBASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DQA1Q5Y7H0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNU6-23P-201ENST00000363283 107 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNU6-1292P-201ENST00000383856 107 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 SNORA22-201ENST00000383907 134 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 MIR515-2-201ENST00000384883 83 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 MIR515-1-201ENST00000384884 83 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 SNORD77.3-201ENST00000391113 65 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 RN7SKP284-201ENST00000411002 343 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 SNRPGP13-201ENST00000442212 177 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 RN7SKP19-201ENST00000516016 252 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNA5SP367-201ENST00000516557 118 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.61□□□□□ -1.99
HLA-DQA1Q5Y7H0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 MIR26A1-201ENST00000362205 77 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 MIR518F-201ENST00000384973 87 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 RN7SKP123-201ENST00000410732 291 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC092427.1-202ENST00000430569 476 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 MTATP6P21-201ENST00000440681 189 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 Z96811.1-201ENST00000445880 108 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 AL021397.1-201ENST00000451806 248 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 AL109933.2-201ENST00000452651 260 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC006483.1-201ENST00000487308 313 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNA5SP236-201ENST00000516169 116 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNU6-589P-201ENST00000516485 107 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 IGKV1-22-201ENST00000524313 326 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC087685.1-201ENST00000587507 141 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 MIR7106-201ENST00000612419 65 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC022513.1-201ENST00000624512 117 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 MIR376A2-201ENST00000636782 80 ntBASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 MIR548A3-201ENST00000385297 97 ntBASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 MIR802-201ENST00000390235 94 ntBASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNA5SP109-201ENST00000391010 116 ntBASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 RNU6-1149P-201ENST00000516810 97 ntBASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 ELOCP29-201ENST00000588193 334 ntBASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 AL670379.3-201ENST00000605040 251 ntBASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 CTSLP2-204ENST00000629029 392 ntBASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
HLA-DQA1Q5Y7H0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.59□□□□□ -2
HLA-DQA1Q5Y7H0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 NDUFB4P4-201ENST00000404822 243 ntBASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 AC107083.1-201ENST00000439643 279 ntBASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 AL135938.1-201ENST00000443141 297 ntBASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 CYCSP26-201ENST00000534107 320 ntBASIC2.58□□□□□ -2
HLA-DQA1Q5Y7H0 MIR3605-201ENST00000583214 100 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms