Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RNU6-1289P-201ENST00000384431 106 ntBASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 Y_RNA.621-201ENST00000411065 96 ntBASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 RN7SKP192-201ENST00000411291 327 ntBASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 AL161935.2-201ENST00000414627 60 ntBASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 HMGN2P23-201ENST00000456759 269 ntBASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 AL049830.1-201ENST00000468034 425 ntBASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 snoU18.1-201ENST00000629629 71 ntBASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
RUNDC3AQ59EK9 ZNF355P-201ENST00000427301 3216 ntBASIC1.78□□□□□ -2.13
RUNDC3AQ59EK9 RNU6-414P-201ENST00000363705 104 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 RNU6-899P-201ENST00000363947 107 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 RNU4-41P-201ENST00000364426 143 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.265-201ENST00000364677 108 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 MIR194-1-201ENST00000384892 85 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 AL603910.2-201ENST00000407268 136 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 AL034345.1-201ENST00000407768 123 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 RNU6-651P-201ENST00000411040 105 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 JTBP1-201ENST00000441314 247 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 RPL23AP54-201ENST00000495129 419 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 MTND1P19-201ENST00000511780 315 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 SNORA77B-201ENST00000578179 125 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 MIR4648-201ENST00000580107 72 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 AC062037.2-201ENST00000610137 73 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 MIR8074-201ENST00000615081 81 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 AC013791.1-201ENST00000616619 62 ntBASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.77□□□□□ -2.13
RUNDC3AQ59EK9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.253-201ENST00000364562 112 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.352-201ENST00000365439 102 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 SNORA36B-201ENST00000410438 131 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 FTH1P12-201ENST00000432137 551 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 Z98949.2-201ENST00000440996 144 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 RPL39P38-201ENST00000467018 153 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 AC005908.1-201ENST00000468701 347 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 RNU7-28P-201ENST00000516759 62 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 SNORA28-201ENST00000606769 126 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 AL591926.4-201ENST00000616895 298 ntBASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.76□□□□□ -2.13
RUNDC3AQ59EK9 RNA5SP482-201ENST00000391269 118 ntBASIC1.75□□□□□ -2.13
RUNDC3AQ59EK9 MIR1267-201ENST00000408723 78 ntBASIC1.75□□□□□ -2.13
RUNDC3AQ59EK9 AL445685.2-201ENST00000422551 342 ntBASIC1.75□□□□□ -2.13
RUNDC3AQ59EK9 CALM2P4-201ENST00000430810 426 ntBASIC1.75□□□□□ -2.13
RUNDC3AQ59EK9 SNORD2.1-201ENST00000458762 69 ntBASIC1.75□□□□□ -2.13
RUNDC3AQ59EK9 MIR4643-201ENST00000577473 78 ntBASIC1.75□□□□□ -2.13
RUNDC3AQ59EK9 AL162424.1-201ENST00000602325 221 ntBASIC1.75□□□□□ -2.13
RUNDC3AQ59EK9 MIRLET7C-201ENST00000362160 84 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 MIR424-201ENST00000362227 98 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.82-201ENST00000363000 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.92-201ENST00000363043 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.203-201ENST00000364106 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.235-201ENST00000364412 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 SNORD48-201ENST00000364953 64 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.306-201ENST00000365015 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.312-201ENST00000365089 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.322-201ENST00000365151 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 RNU6-211P-201ENST00000384047 107 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 RNU6-424P-201ENST00000384367 105 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 MIR1261-201ENST00000408659 82 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 MIR548H3-201ENST00000408771 118 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.650-201ENST00000459002 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 RNU6-437P-201ENST00000459408 95 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 RNU1-41P-201ENST00000516161 162 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 RNU1-48P-201ENST00000516400 162 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.680-201ENST00000516441 93 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.777-201ENST00000516982 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 MIR4419B-201ENST00000577260 68 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 MIR5692C2-201ENST00000577959 77 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.771-201ENST00000598668 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 AC073349.3-201ENST00000617616 186 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.789-201ENST00000622480 102 ntBASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.74□□□□□ -2.13
RUNDC3AQ59EK9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 RNU6-1205P-201ENST00000363625 106 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.277-201ENST00000364754 102 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.307-201ENST00000365022 117 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.350-201ENST00000365409 98 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.477-201ENST00000384352 108 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 MIR30A-201ENST00000385092 71 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 U8.16-201ENST00000391279 133 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 PGBD4P5-201ENST00000445958 426 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 AC107393.1-201ENST00000512403 346 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 AC004817.2-201ENST00000561794 651 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 MIR3945-201ENST00000581853 98 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 AC092881.1-201ENST00000638218 2733 ntBASIC1.73□□□□□ -2.13
RUNDC3AQ59EK9 Y_RNA.54-201ENST00000362766 105 ntBASIC1.72□□□□□ -2.13
RUNDC3AQ59EK9 RNU6-674P-201ENST00000363831 107 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms