Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SNORD68-201ENST00000363214 84 ntBASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 Y_RNA.579-201ENST00000390939 94 ntBASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 RNU2-54P-201ENST00000410299 190 ntBASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 RNU5A-5P-201ENST00000411054 116 ntBASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 PIGPP3-201ENST00000425307 415 ntBASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 RPL39P38-201ENST00000467018 153 ntBASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 RN7SKP179-201ENST00000516126 217 ntBASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-917P-201ENST00000516294 104 ntBASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 AL117336.2-201ENST00000602435 335 ntBASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 MIR6515-201ENST00000619843 57 ntBASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-1115P-201ENST00000362490 106 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 Y_RNA.27-201ENST00000362540 103 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-199P-201ENST00000362954 107 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-1175P-201ENST00000365200 107 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 MIR520G-201ENST00000385064 90 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 RNU11-5P-201ENST00000391216 129 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 AC236972.2-201ENST00000434979 310 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 AL117351.2-201ENST00000513571 157 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-436P-201ENST00000516171 114 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 MIR5188-201ENST00000583467 113 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
SHROOM1Q2M3G4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 MIRLET7C-201ENST00000362160 84 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 Y_RNA.5-201ENST00000362334 102 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 Y_RNA.315-201ENST00000365117 102 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 Y_RNA.329-201ENST00000365209 107 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-342P-201ENST00000384521 104 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 MLLT10P1-201ENST00000418346 262 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 AF228730.4-201ENST00000421457 183 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 AL162725.1-201ENST00000435405 301 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 HSPE1P13-201ENST00000451143 297 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 RNU7-152P-201ENST00000458982 64 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 MTND3P22-201ENST00000510932 243 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 RNU4-77P-201ENST00000516692 156 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 AC211469.2-201ENST00000605461 205 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.11□□□□□ -2.23
SHROOM1Q2M3G4 SNORA25-201ENST00000384384 134 ntBASIC1.1□□□□□ -2.23
SHROOM1Q2M3G4 MIR562-201ENST00000384894 95 ntBASIC1.1□□□□□ -2.23
SHROOM1Q2M3G4 RNA5SP482-201ENST00000391269 118 ntBASIC1.1□□□□□ -2.23
SHROOM1Q2M3G4 SNORA25.10-201ENST00000515926 124 ntBASIC1.1□□□□□ -2.23
SHROOM1Q2M3G4 RNU7-28P-201ENST00000516759 62 ntBASIC1.1□□□□□ -2.23
SHROOM1Q2M3G4 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
SHROOM1Q2M3G4 SNORD58B-201ENST00000607313 66 ntBASIC1.1□□□□□ -2.23
SHROOM1Q2M3G4 AC006157.1-201ENST00000611750 366 ntBASIC1.1□□□□□ -2.23
SHROOM1Q2M3G4 Y_RNA.361-201ENST00000365515 120 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 Y_RNA.419-201ENST00000384041 102 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-163P-201ENST00000384396 106 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 MIR532-201ENST00000385025 91 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 SNORD41-201ENST00000386967 70 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 RNU2-61P-201ENST00000411069 191 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 POLR2J4-204ENST00000418424 324 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 AL160004.2-201ENST00000432935 350 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 SUMO1P2-201ENST00000452524 304 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 SNORA70.12-201ENST00000516084 153 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 RNU6-911P-201ENST00000516523 104 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 AC004832.4-201ENST00000608952 331 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 AC007485.1-201ENST00000616755 206 ntBASIC1.09□□□□□ -2.23
SHROOM1Q2M3G4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.39-201ENST00000362620 98 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 RNU4-79P-201ENST00000362764 141 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 RNU6-1187P-201ENST00000364771 110 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 MIR598-201ENST00000384868 97 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 RNU4-30P-201ENST00000410245 143 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 AC048334.1-201ENST00000477975 159 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 AC114811.1-201ENST00000507207 168 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 RN7SKP295-201ENST00000517264 153 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 MIR3145-201ENST00000580727 82 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 RPS29P30-201ENST00000600975 111 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 AL513534.2-201ENST00000603836 250 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 AC022441.3-201ENST00000605737 136 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 AL133255.1-201ENST00000606374 441 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 AL591926.4-201ENST00000616895 298 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 AC091925.1-201ENST00000623204 462 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SHROOM1Q2M3G4 MIR369-201ENST00000362155 70 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.813-201ENST00000364639 102 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.331-201ENST00000365267 102 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 Y_RNA.458-201ENST00000384240 102 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 RNU6-937P-201ENST00000384325 106 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 MIR526A1-201ENST00000384897 85 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 RNU6-308P-201ENST00000390957 107 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 AL451046.2-201ENST00000403074 277 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 RNU6-855P-201ENST00000410395 104 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 SNORA31.2-201ENST00000516019 134 ntBASIC1.07□□□□□ -2.24
SHROOM1Q2M3G4 RNU7-110P-201ENST00000516891 62 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms