Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 Y_RNA.376-201ENST00000365638 108 ntBASIC1.26□□□□□ -2.21
SRPXP78539 SNORA72.4-201ENST00000384174 132 ntBASIC1.26□□□□□ -2.21
SRPXP78539 RNU6-424P-201ENST00000384367 105 ntBASIC1.26□□□□□ -2.21
SRPXP78539 Y_RNA.574-201ENST00000384766 95 ntBASIC1.26□□□□□ -2.21
SRPXP78539 MIR562-201ENST00000384894 95 ntBASIC1.26□□□□□ -2.21
SRPXP78539 MT-TW-201ENST00000387382 68 ntBASIC1.26□□□□□ -2.21
SRPXP78539 AC093850.1-201ENST00000454121 251 ntBASIC1.26□□□□□ -2.21
SRPXP78539 RNU7-141P-201ENST00000459304 62 ntBASIC1.26□□□□□ -2.21
SRPXP78539 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.26□□□□□ -2.21
SRPXP78539 AC091959.1-201ENST00000495857 238 ntBASIC1.26□□□□□ -2.21
SRPXP78539 RNU6-1338P-201ENST00000516328 91 ntBASIC1.26□□□□□ -2.21
SRPXP78539 RNU7-115P-201ENST00000516433 55 ntBASIC1.26□□□□□ -2.21
SRPXP78539 AC136628.3-201ENST00000521868 290 ntBASIC1.26□□□□□ -2.21
SRPXP78539 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.26□□□□□ -2.21
SRPXP78539 DEFB108E-201ENST00000524692 240 ntBASIC1.26□□□□□ -2.21
SRPXP78539 AL117187.1-201ENST00000555482 181 ntBASIC1.26□□□□□ -2.21
SRPXP78539 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.26□□□□□ -2.21
SRPXP78539 SNORA28-201ENST00000606769 126 ntBASIC1.26□□□□□ -2.21
SRPXP78539 AL365434.2-201ENST00000607979 234 ntBASIC1.26□□□□□ -2.21
SRPXP78539 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.26□□□□□ -2.21
SRPXP78539 MIR548AY-201ENST00000617669 107 ntBASIC1.26□□□□□ -2.21
SRPXP78539 AC106754.2-201ENST00000623006 233 ntBASIC1.26□□□□□ -2.21
SRPXP78539 SNORD3E-202ENST00000627253 216 ntBASIC1.26□□□□□ -2.21
SRPXP78539 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
SRPXP78539 SNORA25.1-201ENST00000362326 128 ntBASIC1.25□□□□□ -2.21
SRPXP78539 RNU6-1123P-201ENST00000362347 106 ntBASIC1.25□□□□□ -2.21
SRPXP78539 Y_RNA.253-201ENST00000364562 112 ntBASIC1.25□□□□□ -2.21
SRPXP78539 RNU6-1323P-201ENST00000384025 107 ntBASIC1.25□□□□□ -2.21
SRPXP78539 RNU6-662P-201ENST00000384253 104 ntBASIC1.25□□□□□ -2.21
SRPXP78539 SNORA72-201ENST00000384339 132 ntBASIC1.25□□□□□ -2.21
SRPXP78539 Y_RNA.483-201ENST00000384380 101 ntBASIC1.25□□□□□ -2.21
SRPXP78539 RNU6-713P-201ENST00000384761 107 ntBASIC1.25□□□□□ -2.21
SRPXP78539 MIR660-201ENST00000385235 97 ntBASIC1.25□□□□□ -2.21
SRPXP78539 RNU6-763P-201ENST00000390865 106 ntBASIC1.25□□□□□ -2.21
SRPXP78539 RNA5SP482-201ENST00000391269 118 ntBASIC1.25□□□□□ -2.21
SRPXP78539 MTCO2P33-201ENST00000402100 465 ntBASIC1.25□□□□□ -2.21
SRPXP78539 MIR1304-201ENST00000408243 91 ntBASIC1.25□□□□□ -2.21
SRPXP78539 U8.19-201ENST00000459095 133 ntBASIC1.25□□□□□ -2.21
SRPXP78539 RPL23AP54-201ENST00000495129 419 ntBASIC1.25□□□□□ -2.21
SRPXP78539 RNU6-250P-201ENST00000516958 103 ntBASIC1.25□□□□□ -2.21
SRPXP78539 AL358944.1-201ENST00000528537 144 ntBASIC1.25□□□□□ -2.21
SRPXP78539 AL162424.1-201ENST00000602325 221 ntBASIC1.25□□□□□ -2.21
SRPXP78539 AP003357.1-201ENST00000604497 148 ntBASIC1.25□□□□□ -2.21
SRPXP78539 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.25□□□□□ -2.21
SRPXP78539 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.25□□□□□ -2.21
SRPXP78539 AP001282.2-201ENST00000616149 309 ntBASIC1.25□□□□□ -2.21
SRPXP78539 AL513423.1-201ENST00000621695 132 ntBASIC1.25□□□□□ -2.21
SRPXP78539 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SRPXP78539 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SRPXP78539 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SRPXP78539 SNORD114-1-201ENST00000362705 72 ntBASIC1.24□□□□□ -2.21
SRPXP78539 Y_RNA.162-201ENST00000363683 102 ntBASIC1.24□□□□□ -2.21
SRPXP78539 Y_RNA.237-201ENST00000364439 102 ntBASIC1.24□□□□□ -2.21
SRPXP78539 RNU6-1105P-201ENST00000384774 107 ntBASIC1.24□□□□□ -2.21
SRPXP78539 MIR517C-201ENST00000385103 95 ntBASIC1.24□□□□□ -2.21
SRPXP78539 SNORA53-201ENST00000391141 249 ntBASIC1.24□□□□□ -2.21
SRPXP78539 MIR934-201ENST00000401241 83 ntBASIC1.24□□□□□ -2.21
SRPXP78539 MIR1278-201ENST00000408753 81 ntBASIC1.24□□□□□ -2.21
SRPXP78539 PIGPP3-201ENST00000425307 415 ntBASIC1.24□□□□□ -2.21
SRPXP78539 AL358176.2-201ENST00000425769 204 ntBASIC1.24□□□□□ -2.21
SRPXP78539 TRBVB-201ENST00000477100 408 ntBASIC1.24□□□□□ -2.21
SRPXP78539 RNU7-28P-201ENST00000516759 62 ntBASIC1.24□□□□□ -2.21
SRPXP78539 AC127455.1-201ENST00000565496 145 ntBASIC1.24□□□□□ -2.21
SRPXP78539 MIR3945-201ENST00000581853 98 ntBASIC1.24□□□□□ -2.21
SRPXP78539 AC005357.1-201ENST00000588399 301 ntBASIC1.24□□□□□ -2.21
SRPXP78539 PRR13P7-201ENST00000605538 430 ntBASIC1.24□□□□□ -2.21
SRPXP78539 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.24□□□□□ -2.21
SRPXP78539 RNU6-457P-201ENST00000363999 107 ntBASIC1.23□□□□□ -2.21
SRPXP78539 RNU6-326P-201ENST00000365480 107 ntBASIC1.23□□□□□ -2.21
SRPXP78539 Y_RNA.396-201ENST00000383949 103 ntBASIC1.23□□□□□ -2.21
SRPXP78539 Y_RNA.461-201ENST00000384263 103 ntBASIC1.23□□□□□ -2.21
SRPXP78539 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.23□□□□□ -2.21
SRPXP78539 MLLT10P1-201ENST00000418346 262 ntBASIC1.23□□□□□ -2.21
SRPXP78539 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.23□□□□□ -2.21
SRPXP78539 AL118496.2-201ENST00000448300 230 ntBASIC1.23□□□□□ -2.21
SRPXP78539 Y_RNA.637-201ENST00000459424 114 ntBASIC1.23□□□□□ -2.21
SRPXP78539 AC092991.1-201ENST00000477176 376 ntBASIC1.23□□□□□ -2.21
SRPXP78539 SERF1AP1-201ENST00000514575 187 ntBASIC1.23□□□□□ -2.21
SRPXP78539 AL512605.2-201ENST00000592972 256 ntBASIC1.23□□□□□ -2.21
SRPXP78539 MIR7974-201ENST00000615835 79 ntBASIC1.23□□□□□ -2.21
SRPXP78539 MIR8062-201ENST00000621515 85 ntBASIC1.23□□□□□ -2.21
SRPXP78539 Y_RNA.47-201ENST00000362697 108 ntBASIC1.22□□□□□ -2.21
SRPXP78539 RNU6-1272P-201ENST00000362776 107 ntBASIC1.22□□□□□ -2.21
SRPXP78539 RNU6-514P-201ENST00000384208 107 ntBASIC1.22□□□□□ -2.21
SRPXP78539 RNU6-472P-201ENST00000384299 107 ntBASIC1.22□□□□□ -2.21
SRPXP78539 SNORA40.18-201ENST00000391200 128 ntBASIC1.22□□□□□ -2.21
SRPXP78539 SNORA36B-201ENST00000410438 131 ntBASIC1.22□□□□□ -2.21
SRPXP78539 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.22□□□□□ -2.21
SRPXP78539 RPS27P16-201ENST00000425758 201 ntBASIC1.22□□□□□ -2.21
SRPXP78539 BTF3P11-201ENST00000426582 477 ntBASIC1.22□□□□□ -2.21
SRPXP78539 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.22□□□□□ -2.21
SRPXP78539 RNU7-12P-201ENST00000516030 62 ntBASIC1.22□□□□□ -2.21
SRPXP78539 RNU7-116P-201ENST00000516940 62 ntBASIC1.22□□□□□ -2.21
SRPXP78539 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.22□□□□□ -2.21
SRPXP78539 WWP1P1-201ENST00000466609 2769 ntBASIC1.22□□□□□ -2.21
SRPXP78539 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.22□□□□□ -2.21
SRPXP78539 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.21□□□□□ -2.22
SRPXP78539 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SRPXP78539 Y_RNA.176-201ENST00000363815 109 ntBASIC1.21□□□□□ -2.22
SRPXP78539 Y_RNA.203-201ENST00000364106 102 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 263.4 ms