Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 POLR2KP2-201ENST00000438155 177 ntBASIC1.48□□□□□ -2.17
IRX4P78413 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.48□□□□□ -2.17
IRX4P78413 LINC01399-202ENST00000458450 244 ntBASIC1.48□□□□□ -2.17
IRX4P78413 RNA5SP481-201ENST00000516814 122 ntBASIC1.48□□□□□ -2.17
IRX4P78413 AC022217.4-201ENST00000604389 163 ntBASIC1.48□□□□□ -2.17
IRX4P78413 AL360085.1-201ENST00000604713 532 ntBASIC1.48□□□□□ -2.17
IRX4P78413 MIR8063-201ENST00000621930 81 ntBASIC1.48□□□□□ -2.17
IRX4P78413 AC127459.3-201ENST00000624328 466 ntBASIC1.48□□□□□ -2.17
IRX4P78413 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.48□□□□□ -2.17
IRX4P78413 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
IRX4P78413 RNU6-770P-201ENST00000363929 105 ntBASIC1.47□□□□□ -2.17
IRX4P78413 SNORD1A-201ENST00000364968 72 ntBASIC1.47□□□□□ -2.17
IRX4P78413 SNORD116-13-201ENST00000384408 92 ntBASIC1.47□□□□□ -2.17
IRX4P78413 Y_RNA.540-201ENST00000384638 111 ntBASIC1.47□□□□□ -2.17
IRX4P78413 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
IRX4P78413 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.47□□□□□ -2.17
IRX4P78413 AC010154.1-201ENST00000425857 269 ntBASIC1.47□□□□□ -2.17
IRX4P78413 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
IRX4P78413 RPS27P1-201ENST00000450552 247 ntBASIC1.47□□□□□ -2.17
IRX4P78413 HSPE1P25-201ENST00000455484 251 ntBASIC1.47□□□□□ -2.17
IRX4P78413 RNU7-34P-201ENST00000459394 64 ntBASIC1.47□□□□□ -2.17
IRX4P78413 AC091021.1-201ENST00000468051 388 ntBASIC1.47□□□□□ -2.17
IRX4P78413 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.47□□□□□ -2.17
IRX4P78413 SEPT14P8-201ENST00000508026 178 ntBASIC1.47□□□□□ -2.17
IRX4P78413 RNU6-496P-201ENST00000516145 99 ntBASIC1.47□□□□□ -2.17
IRX4P78413 SCARNA15.1-201ENST00000516384 125 ntBASIC1.47□□□□□ -2.17
IRX4P78413 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
IRX4P78413 AC011604.1-201ENST00000545978 196 ntBASIC1.47□□□□□ -2.17
IRX4P78413 RPL21P9-201ENST00000556149 474 ntBASIC1.47□□□□□ -2.17
IRX4P78413 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
IRX4P78413 MIR6079-201ENST00000635807 62 ntBASIC1.47□□□□□ -2.17
IRX4P78413 AC099654.10-201ENST00000640395 161 ntBASIC1.47□□□□□ -2.17
IRX4P78413 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.47□□□□□ -2.17
IRX4P78413 AC018630.2-201ENST00000534866 2403 ntBASIC1.47□□□□□ -2.17
IRX4P78413 ICE2P2-201ENST00000483823 2787 ntBASIC1.47□□□□□ -2.17
IRX4P78413 Y_RNA.64-201ENST00000362845 102 ntBASIC1.46□□□□□ -2.18
IRX4P78413 Y_RNA.383-201ENST00000383855 97 ntBASIC1.46□□□□□ -2.18
IRX4P78413 RNU6-136P-201ENST00000384663 107 ntBASIC1.46□□□□□ -2.18
IRX4P78413 Y_RNA.581-201ENST00000391017 97 ntBASIC1.46□□□□□ -2.18
IRX4P78413 RNU6-855P-201ENST00000410395 104 ntBASIC1.46□□□□□ -2.18
IRX4P78413 HSPE1P13-201ENST00000451143 297 ntBASIC1.46□□□□□ -2.18
IRX4P78413 snoU13.27-201ENST00000459278 104 ntBASIC1.46□□□□□ -2.18
IRX4P78413 AC098869.1-201ENST00000481627 292 ntBASIC1.46□□□□□ -2.18
IRX4P78413 AC008737.2-201ENST00000599446 118 ntBASIC1.46□□□□□ -2.18
IRX4P78413 RNU4-90P-201ENST00000362773 141 ntBASIC1.45□□□□□ -2.18
IRX4P78413 RNU4-80P-201ENST00000363200 141 ntBASIC1.45□□□□□ -2.18
IRX4P78413 Y_RNA.145-201ENST00000363527 102 ntBASIC1.45□□□□□ -2.18
IRX4P78413 Y_RNA.172-201ENST00000363765 102 ntBASIC1.45□□□□□ -2.18
IRX4P78413 RNY1-201ENST00000364228 113 ntBASIC1.45□□□□□ -2.18
IRX4P78413 Y_RNA.267-201ENST00000364679 109 ntBASIC1.45□□□□□ -2.18
IRX4P78413 RNU6-738P-201ENST00000384531 106 ntBASIC1.45□□□□□ -2.18
IRX4P78413 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
IRX4P78413 FTH1P12-201ENST00000432137 551 ntBASIC1.45□□□□□ -2.18
IRX4P78413 RNU7-94P-201ENST00000459576 63 ntBASIC1.45□□□□□ -2.18
IRX4P78413 AP003733.2-201ENST00000529409 171 ntBASIC1.45□□□□□ -2.18
IRX4P78413 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.45□□□□□ -2.18
IRX4P78413 MIR4422-201ENST00000581938 83 ntBASIC1.45□□□□□ -2.18
IRX4P78413 AP001485.1-201ENST00000604799 199 ntBASIC1.45□□□□□ -2.18
IRX4P78413 AL353621.2-201ENST00000605340 133 ntBASIC1.45□□□□□ -2.18
IRX4P78413 AC004832.4-201ENST00000608952 331 ntBASIC1.45□□□□□ -2.18
IRX4P78413 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
IRX4P78413 snoU2_19.2-201ENST00000363024 80 ntBASIC1.44□□□□□ -2.18
IRX4P78413 Y_RNA.512-201ENST00000384518 102 ntBASIC1.44□□□□□ -2.18
IRX4P78413 MIR215-201ENST00000384858 110 ntBASIC1.44□□□□□ -2.18
IRX4P78413 RNU11-5P-201ENST00000391216 129 ntBASIC1.44□□□□□ -2.18
IRX4P78413 RNU6-710P-201ENST00000410424 105 ntBASIC1.44□□□□□ -2.18
IRX4P78413 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.44□□□□□ -2.18
IRX4P78413 COX6CP10-201ENST00000416832 224 ntBASIC1.44□□□□□ -2.18
IRX4P78413 AL731563.1-201ENST00000442202 214 ntBASIC1.44□□□□□ -2.18
IRX4P78413 MTND5P22-201ENST00000458380 195 ntBASIC1.44□□□□□ -2.18
IRX4P78413 RNU6-1143P-201ENST00000516125 104 ntBASIC1.44□□□□□ -2.18
IRX4P78413 RNU6-970P-201ENST00000516312 107 ntBASIC1.44□□□□□ -2.18
IRX4P78413 RNU6-1291P-201ENST00000516591 104 ntBASIC1.44□□□□□ -2.18
IRX4P78413 RNU6-635P-201ENST00000516651 102 ntBASIC1.44□□□□□ -2.18
IRX4P78413 RNU6-1096P-201ENST00000517089 102 ntBASIC1.44□□□□□ -2.18
IRX4P78413 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.44□□□□□ -2.18
IRX4P78413 MIR4709-201ENST00000577272 72 ntBASIC1.44□□□□□ -2.18
IRX4P78413 AL929325.1-201ENST00000603096 117 ntBASIC1.44□□□□□ -2.18
IRX4P78413 MIR8054-201ENST00000620877 86 ntBASIC1.44□□□□□ -2.18
IRX4P78413 MIR302D-201ENST00000362275 68 ntBASIC1.43□□□□□ -2.18
IRX4P78413 MIR96-201ENST00000362288 78 ntBASIC1.43□□□□□ -2.18
IRX4P78413 Y_RNA.222-201ENST00000364264 102 ntBASIC1.43□□□□□ -2.18
IRX4P78413 RNU6-290P-201ENST00000365212 101 ntBASIC1.43□□□□□ -2.18
IRX4P78413 Y_RNA.418-201ENST00000384029 102 ntBASIC1.43□□□□□ -2.18
IRX4P78413 Y_RNA.459-201ENST00000384251 102 ntBASIC1.43□□□□□ -2.18
IRX4P78413 Y_RNA.541-201ENST00000384640 113 ntBASIC1.43□□□□□ -2.18
IRX4P78413 RNU6-713P-201ENST00000384761 107 ntBASIC1.43□□□□□ -2.18
IRX4P78413 RNA5SP511-201ENST00000410487 115 ntBASIC1.43□□□□□ -2.18
IRX4P78413 AL161935.2-201ENST00000414627 60 ntBASIC1.43□□□□□ -2.18
IRX4P78413 MTND2P23-201ENST00000422990 651 ntBASIC1.43□□□□□ -2.18
IRX4P78413 AC024067.1-201ENST00000426199 223 ntBASIC1.43□□□□□ -2.18
IRX4P78413 DYNLT3P2-201ENST00000442517 295 ntBASIC1.43□□□□□ -2.18
IRX4P78413 RNU6-327P-201ENST00000516270 127 ntBASIC1.43□□□□□ -2.18
IRX4P78413 SNORA31.10-201ENST00000516482 106 ntBASIC1.43□□□□□ -2.18
IRX4P78413 AC091178.2-201ENST00000584401 117 ntBASIC1.43□□□□□ -2.18
IRX4P78413 MIR6078-201ENST00000611069 100 ntBASIC1.43□□□□□ -2.18
IRX4P78413 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
IRX4P78413 RNU6-238P-201ENST00000363313 106 ntBASIC1.42□□□□□ -2.18
IRX4P78413 RNU6-950P-201ENST00000384651 107 ntBASIC1.42□□□□□ -2.18
IRX4P78413 Y_RNA.569-201ENST00000384749 103 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms