Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 U6.73-201ENST00000619194 103 ntBASIC2.72□□□□□ -1.97
NKX3-2P78367 AP001340.1-201ENST00000624405 217 ntBASIC2.72□□□□□ -1.97
NKX3-2P78367 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.72□□□□□ -1.97
NKX3-2P78367 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
NKX3-2P78367 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NKX3-2P78367 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
NKX3-2P78367 Y_RNA.796-201ENST00000364268 102 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 RNU6-978P-201ENST00000364371 103 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 Y_RNA.799-201ENST00000364992 102 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 RNU6-80P-201ENST00000384195 107 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 MIR1253-201ENST00000408273 105 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
NKX3-2P78367 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.71□□□□□ -1.98
NKX3-2P78367 HMGN2P34-201ENST00000437647 269 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 SNORD11-201ENST00000459124 84 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 AC018868.1-201ENST00000491307 315 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 RNU6-1299P-201ENST00000516316 100 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 Y_RNA.686-201ENST00000516548 134 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 AL359881.1-201ENST00000602916 267 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 AL355297.2-201ENST00000604792 129 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 AC046143.2-201ENST00000609789 160 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 uc_338.4-201ENST00000616635 176 ntBASIC2.71□□□□□ -1.98
NKX3-2P78367 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NKX3-2P78367 Y_RNA.91-201ENST00000363042 107 ntBASIC2.7□□□□□ -1.98
NKX3-2P78367 RNU6-1209P-201ENST00000363655 107 ntBASIC2.7□□□□□ -1.98
NKX3-2P78367 RNU6-915P-201ENST00000364943 103 ntBASIC2.7□□□□□ -1.98
NKX3-2P78367 Y_RNA.353-201ENST00000365440 108 ntBASIC2.7□□□□□ -1.98
NKX3-2P78367 Y_RNA.525-201ENST00000384570 113 ntBASIC2.7□□□□□ -1.98
NKX3-2P78367 RNU2-55P-201ENST00000411146 174 ntBASIC2.7□□□□□ -1.98
NKX3-2P78367 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.7□□□□□ -1.98
NKX3-2P78367 RNU4-57P-201ENST00000515980 135 ntBASIC2.7□□□□□ -1.98
NKX3-2P78367 RNU6-667P-201ENST00000517186 102 ntBASIC2.7□□□□□ -1.98
NKX3-2P78367 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX3-2P78367 MIR5194-201ENST00000582634 120 ntBASIC2.7□□□□□ -1.98
NKX3-2P78367 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.7□□□□□ -1.98
NKX3-2P78367 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX3-2P78367 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
NKX3-2P78367 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
NKX3-2P78367 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX3-2P78367 Y_RNA.294-201ENST00000364916 102 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 RNU6-1080P-201ENST00000383982 107 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 RNU6-1186P-201ENST00000410429 97 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 RNU2-63P-201ENST00000410792 194 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 AC104389.3-201ENST00000445629 235 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 RNU7-107P-201ENST00000459121 61 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX3-2P78367 SNORD77.4-201ENST00000516158 81 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 RNU6-1096P-201ENST00000517089 102 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 MIR5007-201ENST00000583098 95 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 AC073413.2-201ENST00000604332 360 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.69□□□□□ -1.98
NKX3-2P78367 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX3-2P78367 SNORD114-1-201ENST00000362705 72 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 RNU1-96P-201ENST00000364163 162 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 Y_RNA.273-201ENST00000364703 102 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 RNU6-215P-201ENST00000365169 102 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 Y_RNA.584-201ENST00000391090 114 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 AC245047.4-201ENST00000433189 144 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 AC011406.1-201ENST00000512440 370 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 RNU6-659P-201ENST00000516454 104 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 RNA5SP281-201ENST00000516504 135 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 RNU6-826P-201ENST00000516827 104 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 AC090142.3-201ENST00000519012 385 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX3-2P78367 MIR2681-201ENST00000581814 105 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 U7.2-201ENST00000607576 63 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 FO624990.1-201ENST00000636373 85 ntBASIC2.68□□□□□ -1.98
NKX3-2P78367 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
NKX3-2P78367 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 Y_RNA.634-201ENST00000364811 113 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 RNA5SP125-201ENST00000364843 120 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 MIR562-201ENST00000384894 95 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 MIR561-201ENST00000385216 97 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 RNA5SP467-201ENST00000391274 118 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 RNU2-70P-201ENST00000410718 179 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.67□□□□□ -1.98
NKX3-2P78367 AC026436.1-201ENST00000510537 270 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 RNU6-1041P-201ENST00000516254 102 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 RNU7-128P-201ENST00000517247 62 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 AL160236.1-201ENST00000556317 195 ntBASIC2.67□□□□□ -1.98
NKX3-2P78367 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NKX3-2P78367 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.66□□□□□ -1.98
NKX3-2P78367 snoU2-30.2-201ENST00000362805 70 ntBASIC2.66□□□□□ -1.98
NKX3-2P78367 RNU1-138P-201ENST00000384093 164 ntBASIC2.66□□□□□ -1.98
NKX3-2P78367 RNU7-149P-201ENST00000516739 59 ntBASIC2.66□□□□□ -1.98
NKX3-2P78367 DEFB122-202ENST00000569013 197 ntBASIC2.66□□□□□ -1.98
NKX3-2P78367 AC067747.1-201ENST00000608026 250 ntBASIC2.66□□□□□ -1.98
NKX3-2P78367 Pinc.1-201ENST00000616452 154 ntBASIC2.66□□□□□ -1.98
NKX3-2P78367 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.66□□□□□ -1.98
NKX3-2P78367 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.66□□□□□ -1.98
NKX3-2P78367 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.65□□□□□ -1.99
NKX3-2P78367 RNU6-235P-201ENST00000362644 107 ntBASIC2.65□□□□□ -1.99
NKX3-2P78367 U8.1-201ENST00000362843 134 ntBASIC2.65□□□□□ -1.99
NKX3-2P78367 RNA5SP393-201ENST00000363423 117 ntBASIC2.65□□□□□ -1.99
NKX3-2P78367 SNORA25.7-201ENST00000364375 127 ntBASIC2.65□□□□□ -1.99
NKX3-2P78367 SNORD114-6-201ENST00000364393 72 ntBASIC2.65□□□□□ -1.99
NKX3-2P78367 SNORD114-30-201ENST00000364448 72 ntBASIC2.65□□□□□ -1.99
NKX3-2P78367 Y_RNA.621-201ENST00000411065 96 ntBASIC2.65□□□□□ -1.99
NKX3-2P78367 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.65□□□□□ -1.99
NKX3-2P78367 RN7SL297P-201ENST00000483161 293 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms