Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.22□□□□□ -2.6
CKS1BP61024 RNA5SP25-201ENST00000410815 110 ntBASIC-1.22□□□□□ -2.6
CKS1BP61024 MTCO2P8-201ENST00000412213 658 ntBASIC-1.22□□□□□ -2.6
CKS1BP61024 MTCO1P20-201ENST00000425366 358 ntBASIC-1.22□□□□□ -2.6
CKS1BP61024 RNU2-13P-201ENST00000515909 113 ntBASIC-1.22□□□□□ -2.6
CKS1BP61024 AC005828.6-201ENST00000606610 232 ntBASIC-1.22□□□□□ -2.6
CKS1BP61024 AL590491.3-201ENST00000610731 82 ntBASIC-1.22□□□□□ -2.6
CKS1BP61024 MIR655-201ENST00000362159 97 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 RNU6-35P-201ENST00000384530 107 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 MIR1-2-201ENST00000384961 85 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 MT-TF-201ENST00000387314 71 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 RNU6-855P-201ENST00000410395 104 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 AL512286.1-201ENST00000439244 400 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 SNORA31.14-201ENST00000516728 116 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 AC022616.4-201ENST00000522985 181 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 NAMPTP3-201ENST00000569273 224 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 CPDP1-201ENST00000579660 283 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 MIR4677-201ENST00000584153 80 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 AC006566.1-201ENST00000608943 513 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 MIR8066-201ENST00000617280 78 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 AC009248.2-201ENST00000619826 254 ntBASIC-1.23□□□□□ -2.61
CKS1BP61024 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.23□□□□□ -2.61
CKS1BP61024 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 SNORD14E-201ENST00000364009 85 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 MIR548L-201ENST00000408303 86 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 USP9YP12-201ENST00000450481 570 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 AL138752.1-201ENST00000452964 351 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 U8.19-201ENST00000459095 133 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 U8.22-201ENST00000459141 133 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 snoU13.16-201ENST00000459350 104 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 AC104576.1-201ENST00000524225 88 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.24□□□□□ -2.61
CKS1BP61024 UBL5P4-201ENST00000562584 236 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 AL355297.3-201ENST00000604082 446 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 U6.115-201ENST00000636045 103 ntBASIC-1.24□□□□□ -2.61
CKS1BP61024 MIR635-201ENST00000384830 98 ntBASIC-1.25□□□□□ -2.61
CKS1BP61024 MIR588-201ENST00000384900 83 ntBASIC-1.25□□□□□ -2.61
CKS1BP61024 MTATP6P23-201ENST00000440153 476 ntBASIC-1.25□□□□□ -2.61
CKS1BP61024 AC107297.1-201ENST00000459991 176 ntBASIC-1.25□□□□□ -2.61
CKS1BP61024 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.25□□□□□ -2.61
CKS1BP61024 AL157687.1-201ENST00000554853 619 ntBASIC-1.25□□□□□ -2.61
CKS1BP61024 AC244669.1-204ENST00000621564 178 ntBASIC-1.25□□□□□ -2.61
CKS1BP61024 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.26□□□□□ -2.61
CKS1BP61024 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.26□□□□□ -2.61
CKS1BP61024 SNORA3B-201ENST00000391305 131 ntBASIC-1.26□□□□□ -2.61
CKS1BP61024 RNU6-325P-201ENST00000411132 105 ntBASIC-1.26□□□□□ -2.61
CKS1BP61024 AC244250.2-201ENST00000418731 148 ntBASIC-1.26□□□□□ -2.61
CKS1BP61024 Z82188.1-201ENST00000436709 154 ntBASIC-1.26□□□□□ -2.61
CKS1BP61024 AC072046.2-201ENST00000618366 268 ntBASIC-1.26□□□□□ -2.61
CKS1BP61024 AC023510.2-201ENST00000622162 746 ntBASIC-1.26□□□□□ -2.61
CKS1BP61024 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.26□□□□□ -2.61
CKS1BP61024 ZNF299P-201ENST00000406845 1804 ntBASIC-1.26□□□□□ -2.61
CKS1BP61024 RNU6-324P-201ENST00000363957 106 ntBASIC-1.27□□□□□ -2.61
CKS1BP61024 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.27□□□□□ -2.61
CKS1BP61024 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.27□□□□□ -2.61
CKS1BP61024 SNORD38B-201ENST00000384690 67 ntBASIC-1.27□□□□□ -2.61
CKS1BP61024 MIR196A1-201ENST00000388006 70 ntBASIC-1.27□□□□□ -2.61
CKS1BP61024 AL590002.1-201ENST00000406554 418 ntBASIC-1.27□□□□□ -2.61
CKS1BP61024 FCF1P9-201ENST00000412546 282 ntBASIC-1.27□□□□□ -2.61
CKS1BP61024 SNRPGP10-201ENST00000432323 225 ntBASIC-1.27□□□□□ -2.61
CKS1BP61024 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.27□□□□□ -2.61
CKS1BP61024 AC134878.1-201ENST00000619901 243 ntBASIC-1.27□□□□□ -2.61
CKS1BP61024 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.28□□□□□ -2.61
CKS1BP61024 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.28□□□□□ -2.61
CKS1BP61024 SSR1P2-201ENST00000415208 787 ntBASIC-1.28□□□□□ -2.61
CKS1BP61024 MTCO2P27-201ENST00000420740 428 ntBASIC-1.28□□□□□ -2.61
CKS1BP61024 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-1.28□□□□□ -2.61
CKS1BP61024 snoU13.2-201ENST00000459201 104 ntBASIC-1.28□□□□□ -2.61
CKS1BP61024 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.28□□□□□ -2.61
CKS1BP61024 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.28□□□□□ -2.61
CKS1BP61024 SCARNA1-201ENST00000517138 166 ntBASIC-1.28□□□□□ -2.61
CKS1BP61024 RNU7-181P-201ENST00000517234 74 ntBASIC-1.28□□□□□ -2.61
CKS1BP61024 AP000811.1-201ENST00000603803 651 ntBASIC-1.28□□□□□ -2.61
CKS1BP61024 AC027807.2-201ENST00000616099 408 ntBASIC-1.28□□□□□ -2.61
CKS1BP61024 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.28□□□□□ -2.61
CKS1BP61024 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.29□□□□□ -2.62
CKS1BP61024 RNU6-933P-201ENST00000384424 107 ntBASIC-1.29□□□□□ -2.62
CKS1BP61024 MIR563-201ENST00000385080 79 ntBASIC-1.29□□□□□ -2.62
CKS1BP61024 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
CKS1BP61024 MIR876-201ENST00000401147 81 ntBASIC-1.29□□□□□ -2.62
CKS1BP61024 RNU4-83P-201ENST00000410863 133 ntBASIC-1.29□□□□□ -2.62
CKS1BP61024 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.29□□□□□ -2.62
CKS1BP61024 SNORA25.10-201ENST00000515926 124 ntBASIC-1.29□□□□□ -2.62
CKS1BP61024 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.29□□□□□ -2.62
CKS1BP61024 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.29□□□□□ -2.62
CKS1BP61024 MIR548AX-201ENST00000580117 73 ntBASIC-1.29□□□□□ -2.62
CKS1BP61024 AL158063.1-201ENST00000615349 536 ntBASIC-1.29□□□□□ -2.62
CKS1BP61024 SNORD50.1-201ENST00000362987 71 ntBASIC-1.3□□□□□ -2.62
CKS1BP61024 SNORD114-15-201ENST00000364687 72 ntBASIC-1.3□□□□□ -2.62
CKS1BP61024 MTCO1P29-201ENST00000496868 288 ntBASIC-1.3□□□□□ -2.62
CKS1BP61024 RNU6-475P-201ENST00000516073 104 ntBASIC-1.3□□□□□ -2.62
CKS1BP61024 AC018714.1-201ENST00000605028 208 ntBASIC-1.3□□□□□ -2.62
CKS1BP61024 SNORA70.25-201ENST00000612741 95 ntBASIC-1.3□□□□□ -2.62
CKS1BP61024 AC010205.1-201ENST00000616668 449 ntBASIC-1.3□□□□□ -2.62
CKS1BP61024 AC006927.3-201ENST00000638789 384 ntBASIC-1.3□□□□□ -2.62
CKS1BP61024 RPL30P16-201ENST00000419341 429 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms