Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU7-115P-201ENST00000516433 55 ntBASIC1.54□□□□□ -2.16
CDH11P55287 RNU6-1291P-201ENST00000516591 104 ntBASIC1.54□□□□□ -2.16
CDH11P55287 SNORA27.4-201ENST00000516650 95 ntBASIC1.54□□□□□ -2.16
CDH11P55287 CBX3P4-201ENST00000538909 354 ntBASIC1.54□□□□□ -2.16
CDH11P55287 SNORA77B-201ENST00000578179 125 ntBASIC1.54□□□□□ -2.16
CDH11P55287 AL929325.1-201ENST00000603096 117 ntBASIC1.54□□□□□ -2.16
CDH11P55287 AC095038.3-201ENST00000634439 195 ntBASIC1.54□□□□□ -2.16
CDH11P55287 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.54□□□□□ -2.16
CDH11P55287 U8.7-201ENST00000364940 136 ntBASIC1.53□□□□□ -2.16
CDH11P55287 RNU6-203P-201ENST00000384038 104 ntBASIC1.53□□□□□ -2.16
CDH11P55287 RNU6-1031P-201ENST00000384773 107 ntBASIC1.53□□□□□ -2.16
CDH11P55287 MIR562-201ENST00000384894 95 ntBASIC1.53□□□□□ -2.16
CDH11P55287 snosnR66.1-201ENST00000391095 99 ntBASIC1.53□□□□□ -2.16
CDH11P55287 RNU6-1248P-201ENST00000391096 64 ntBASIC1.53□□□□□ -2.16
CDH11P55287 MIR1302-6-201ENST00000408466 90 ntBASIC1.53□□□□□ -2.16
CDH11P55287 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.53□□□□□ -2.16
CDH11P55287 MTND4LP30-201ENST00000454092 297 ntBASIC1.53□□□□□ -2.16
CDH11P55287 MIR4503-201ENST00000582187 83 ntBASIC1.53□□□□□ -2.16
CDH11P55287 AP000942.3-201ENST00000603702 160 ntBASIC1.53□□□□□ -2.16
CDH11P55287 AP003357.1-201ENST00000604497 148 ntBASIC1.53□□□□□ -2.16
CDH11P55287 AL391987.6-201ENST00000305671 199 ntBASIC1.52□□□□□ -2.17
CDH11P55287 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
CDH11P55287 RNU6-1048P-201ENST00000364054 107 ntBASIC1.52□□□□□ -2.17
CDH11P55287 Y_RNA.267-201ENST00000364679 109 ntBASIC1.52□□□□□ -2.17
CDH11P55287 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.52□□□□□ -2.17
CDH11P55287 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.52□□□□□ -2.17
CDH11P55287 AL603825.1-201ENST00000438481 80 ntBASIC1.52□□□□□ -2.17
CDH11P55287 SNORD127-201ENST00000458892 86 ntBASIC1.52□□□□□ -2.17
CDH11P55287 SNORD13-201ENST00000459299 104 ntBASIC1.52□□□□□ -2.17
CDH11P55287 RNU6-250P-201ENST00000516958 103 ntBASIC1.52□□□□□ -2.17
CDH11P55287 SCARNA24.2-201ENST00000516968 130 ntBASIC1.52□□□□□ -2.17
CDH11P55287 AP002004.2-201ENST00000531656 154 ntBASIC1.52□□□□□ -2.17
CDH11P55287 AC011604.1-201ENST00000545978 196 ntBASIC1.52□□□□□ -2.17
CDH11P55287 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.52□□□□□ -2.17
CDH11P55287 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.52□□□□□ -2.17
CDH11P55287 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
CDH11P55287 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.52□□□□□ -2.17
CDH11P55287 AC021506.2-201ENST00000612354 169 ntBASIC1.52□□□□□ -2.17
CDH11P55287 AC068647.2-201ENST00000637380 353 ntBASIC1.52□□□□□ -2.17
CDH11P55287 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CDH11P55287 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CDH11P55287 SNORA25.1-201ENST00000362326 128 ntBASIC1.51□□□□□ -2.17
CDH11P55287 RNU6-1272P-201ENST00000362776 107 ntBASIC1.51□□□□□ -2.17
CDH11P55287 Y_RNA.275-201ENST00000364726 110 ntBASIC1.51□□□□□ -2.17
CDH11P55287 SNORA72-201ENST00000384339 132 ntBASIC1.51□□□□□ -2.17
CDH11P55287 Y_RNA.562-201ENST00000384695 113 ntBASIC1.51□□□□□ -2.17
CDH11P55287 RNU6-763P-201ENST00000390865 106 ntBASIC1.51□□□□□ -2.17
CDH11P55287 RN7SKP200-201ENST00000410564 320 ntBASIC1.51□□□□□ -2.17
CDH11P55287 Z98949.2-201ENST00000440996 144 ntBASIC1.51□□□□□ -2.17
CDH11P55287 JTBP1-201ENST00000441314 247 ntBASIC1.51□□□□□ -2.17
CDH11P55287 RNU7-141P-201ENST00000459304 62 ntBASIC1.51□□□□□ -2.17
CDH11P55287 AC117454.1-201ENST00000491120 168 ntBASIC1.51□□□□□ -2.17
CDH11P55287 OR9P1P-201ENST00000496431 281 ntBASIC1.51□□□□□ -2.17
CDH11P55287 AC024405.2-202ENST00000532731 184 ntBASIC1.51□□□□□ -2.17
CDH11P55287 AC127455.1-201ENST00000565496 145 ntBASIC1.51□□□□□ -2.17
CDH11P55287 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
CDH11P55287 RNU6-662P-201ENST00000384253 104 ntBASIC1.5□□□□□ -2.17
CDH11P55287 RNU6-463P-201ENST00000384340 107 ntBASIC1.5□□□□□ -2.17
CDH11P55287 RNU6-950P-201ENST00000384651 107 ntBASIC1.5□□□□□ -2.17
CDH11P55287 Y_RNA.556-201ENST00000384677 113 ntBASIC1.5□□□□□ -2.17
CDH11P55287 U8.19-201ENST00000459095 133 ntBASIC1.5□□□□□ -2.17
CDH11P55287 RNU7-116P-201ENST00000516940 62 ntBASIC1.5□□□□□ -2.17
CDH11P55287 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH11P55287 MIR4709-201ENST00000577272 72 ntBASIC1.5□□□□□ -2.17
CDH11P55287 MIR3683-201ENST00000580847 82 ntBASIC1.5□□□□□ -2.17
CDH11P55287 AC012433.1-201ENST00000588916 398 ntBASIC1.5□□□□□ -2.17
CDH11P55287 POLR3GP1-201ENST00000594073 261 ntBASIC1.5□□□□□ -2.17
CDH11P55287 AC037487.3-201ENST00000606668 112 ntBASIC1.5□□□□□ -2.17
CDH11P55287 MIR548AY-201ENST00000617669 107 ntBASIC1.5□□□□□ -2.17
CDH11P55287 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.5□□□□□ -2.17
CDH11P55287 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CDH11P55287 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDH11P55287 MIRLET7C-201ENST00000362160 84 ntBASIC1.49□□□□□ -2.17
CDH11P55287 Y_RNA.193-201ENST00000363979 102 ntBASIC1.49□□□□□ -2.17
CDH11P55287 RNU4-13P-201ENST00000364019 141 ntBASIC1.49□□□□□ -2.17
CDH11P55287 RNU4-41P-201ENST00000364426 143 ntBASIC1.49□□□□□ -2.17
CDH11P55287 RNU6-1080P-201ENST00000383982 107 ntBASIC1.49□□□□□ -2.17
CDH11P55287 RNU6-574P-201ENST00000384265 107 ntBASIC1.49□□□□□ -2.17
CDH11P55287 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CDH11P55287 RNU2-38P-201ENST00000410856 79 ntBASIC1.49□□□□□ -2.17
CDH11P55287 COX6CP10-201ENST00000416832 224 ntBASIC1.49□□□□□ -2.17
CDH11P55287 AL049830.1-201ENST00000468034 425 ntBASIC1.49□□□□□ -2.17
CDH11P55287 MTND1P19-201ENST00000511780 315 ntBASIC1.49□□□□□ -2.17
CDH11P55287 AL512605.2-201ENST00000592972 256 ntBASIC1.49□□□□□ -2.17
CDH11P55287 AL162424.1-201ENST00000602325 221 ntBASIC1.49□□□□□ -2.17
CDH11P55287 AL008718.3-201ENST00000610217 321 ntBASIC1.49□□□□□ -2.17
CDH11P55287 U2.14-201ENST00000615943 113 ntBASIC1.49□□□□□ -2.17
CDH11P55287 U6.104-201ENST00000637979 90 ntBASIC1.49□□□□□ -2.17
CDH11P55287 Y_RNA.14-201ENST00000362415 103 ntBASIC1.48□□□□□ -2.17
CDH11P55287 Y_RNA.44-201ENST00000362676 108 ntBASIC1.48□□□□□ -2.17
CDH11P55287 Y_RNA.144-201ENST00000363521 113 ntBASIC1.48□□□□□ -2.17
CDH11P55287 Y_RNA.452-201ENST00000384202 108 ntBASIC1.48□□□□□ -2.17
CDH11P55287 RNU6-651P-201ENST00000411040 105 ntBASIC1.48□□□□□ -2.17
CDH11P55287 AC108667.1-201ENST00000428618 249 ntBASIC1.48□□□□□ -2.17
CDH11P55287 FTH1P12-201ENST00000432137 551 ntBASIC1.48□□□□□ -2.17
CDH11P55287 AC233266.1-201ENST00000454518 96 ntBASIC1.48□□□□□ -2.17
CDH11P55287 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH11P55287 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH11P55287 RNU7-28P-201ENST00000516759 62 ntBASIC1.48□□□□□ -2.17
CDH11P55287 MIR4643-201ENST00000577473 78 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms