Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
EPHA4P54764 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
EPHA4P54764 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.22□□□□□ -1.89
EPHA4P54764 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
EPHA4P54764 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.22□□□□□ -1.89
EPHA4P54764 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.22□□□□□ -1.89
EPHA4P54764 Y_RNA.328-201ENST00000365208 113 ntBASIC3.22□□□□□ -1.89
EPHA4P54764 MIR181B1-201ENST00000385240 110 ntBASIC3.22□□□□□ -1.89
EPHA4P54764 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.22□□□□□ -1.89
EPHA4P54764 AL049873.1-201ENST00000480540 376 ntBASIC3.22□□□□□ -1.89
EPHA4P54764 AP003484.1-201ENST00000530974 250 ntBASIC3.22□□□□□ -1.89
EPHA4P54764 SNORA28-201ENST00000606769 126 ntBASIC3.22□□□□□ -1.89
EPHA4P54764 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
EPHA4P54764 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
EPHA4P54764 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.21□□□□□ -1.89
EPHA4P54764 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.21□□□□□ -1.9
EPHA4P54764 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
EPHA4P54764 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
EPHA4P54764 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
EPHA4P54764 Y_RNA.323-201ENST00000365157 109 ntBASIC3.21□□□□□ -1.9
EPHA4P54764 Y_RNA.544-201ENST00000384650 113 ntBASIC3.21□□□□□ -1.9
EPHA4P54764 SNORA48.8-201ENST00000391324 134 ntBASIC3.21□□□□□ -1.9
EPHA4P54764 RNU6-94P-201ENST00000607728 107 ntBASIC3.21□□□□□ -1.9
EPHA4P54764 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.21□□□□□ -1.9
EPHA4P54764 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
EPHA4P54764 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
EPHA4P54764 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
EPHA4P54764 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.2□□□□□ -1.9
EPHA4P54764 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
EPHA4P54764 Y_RNA.351-201ENST00000365436 96 ntBASIC3.2□□□□□ -1.9
EPHA4P54764 Y_RNA.362-201ENST00000365518 110 ntBASIC3.2□□□□□ -1.9
EPHA4P54764 MIR1302-4-201ENST00000408701 150 ntBASIC3.2□□□□□ -1.9
EPHA4P54764 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
EPHA4P54764 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.2□□□□□ -1.9
EPHA4P54764 RNU7-164P-201ENST00000459221 62 ntBASIC3.2□□□□□ -1.9
EPHA4P54764 SNORA40.13-201ENST00000516379 120 ntBASIC3.2□□□□□ -1.9
EPHA4P54764 SNORD36C-201ENST00000516733 66 ntBASIC3.2□□□□□ -1.9
EPHA4P54764 AL035470.1-201ENST00000622571 220 ntBASIC3.2□□□□□ -1.9
EPHA4P54764 ICE2P2-201ENST00000483823 2787 ntBASIC3.2□□□□□ -1.9
EPHA4P54764 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.2□□□□□ -1.9
EPHA4P54764 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
EPHA4P54764 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
EPHA4P54764 RNU6-349P-201ENST00000362402 107 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 Y_RNA.298-201ENST00000364960 107 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 Y_RNA.440-201ENST00000384120 114 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 AL627390.1-201ENST00000396055 340 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 SNRPGP14-201ENST00000435400 219 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.19□□□□□ -1.9
EPHA4P54764 AL445687.1-201ENST00000439946 251 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 AC021205.2-201ENST00000480069 347 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 RNU6-970P-201ENST00000516312 107 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 SUMO2P16-201ENST00000519475 264 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 AC024614.2-201ENST00000577584 372 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.19□□□□□ -1.9
EPHA4P54764 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
EPHA4P54764 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
EPHA4P54764 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
EPHA4P54764 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
EPHA4P54764 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
EPHA4P54764 MIR29C-201ENST00000385231 88 ntBASIC3.18□□□□□ -1.9
EPHA4P54764 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.18□□□□□ -1.9
EPHA4P54764 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
EPHA4P54764 AP001318.4-201ENST00000616637 121 ntBASIC3.18□□□□□ -1.9
EPHA4P54764 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
EPHA4P54764 MAPK10-362ENST00000641864 4484 ntBASIC3.18□□□□□ -1.9
EPHA4P54764 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
EPHA4P54764 AC092435.3-201ENST00000565538 3654 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
EPHA4P54764 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.17□□□□□ -1.9
EPHA4P54764 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EPHA4P54764 RNU6-424P-201ENST00000384367 105 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 RNU6-163P-201ENST00000384396 106 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 Z92545.1-201ENST00000411782 234 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 AC069257.2-201ENST00000441819 155 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 STAG3L5P-204ENST00000443759 179 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 RN7SL504P-201ENST00000494496 287 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.17□□□□□ -1.9
EPHA4P54764 MIR3169-201ENST00000578032 83 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 MIR3163-201ENST00000581592 73 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 MIR4325-201ENST00000583049 90 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.17□□□□□ -1.9
EPHA4P54764 AC005786.1-201ENST00000588553 154 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 AC069114.2-201ENST00000604699 304 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 AC005000.2-201ENST00000605468 310 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EPHA4P54764 AL596211.1-201ENST00000569873 2277 ntBASIC3.17□□□□□ -1.9
EPHA4P54764 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.17□□□□□ -1.9
EPHA4P54764 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
EPHA4P54764 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EPHA4P54764 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
EPHA4P54764 MIR30E-201ENST00000362104 92 ntBASIC3.16□□□□□ -1.9
EPHA4P54764 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
EPHA4P54764 SNORD115-3-201ENST00000363100 82 ntBASIC3.16□□□□□ -1.9
EPHA4P54764 Y_RNA.348-201ENST00000365403 103 ntBASIC3.16□□□□□ -1.9
EPHA4P54764 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
EPHA4P54764 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.16□□□□□ -1.9
EPHA4P54764 AC006483.1-201ENST00000487308 313 ntBASIC3.16□□□□□ -1.9
EPHA4P54764 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms