Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.38□□□□□ -2.19
LIMK1P53667 AC022441.3-201ENST00000605737 136 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 uc_338.22-201ENST00000622722 187 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
LIMK1P53667 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
LIMK1P53667 Y_RNA.329-201ENST00000365209 107 ntBASIC1.37□□□□□ -2.19
LIMK1P53667 Y_RNA.445-201ENST00000384168 102 ntBASIC1.37□□□□□ -2.19
LIMK1P53667 U8.16-201ENST00000391279 133 ntBASIC1.37□□□□□ -2.19
LIMK1P53667 RNU6-1199P-201ENST00000411249 104 ntBASIC1.37□□□□□ -2.19
LIMK1P53667 AC024067.1-201ENST00000426199 223 ntBASIC1.37□□□□□ -2.19
LIMK1P53667 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.37□□□□□ -2.19
LIMK1P53667 AC040926.1-201ENST00000530195 238 ntBASIC1.37□□□□□ -2.19
LIMK1P53667 AC010205.1-201ENST00000616668 449 ntBASIC1.37□□□□□ -2.19
LIMK1P53667 AC090574.1-201ENST00000623186 233 ntBASIC1.37□□□□□ -2.19
LIMK1P53667 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
LIMK1P53667 SNORD68-201ENST00000363214 84 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 Y_RNA.143-201ENST00000363520 106 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 Y_RNA.374-201ENST00000365606 101 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 RNU6-1080P-201ENST00000383982 107 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 RNU6-21P-201ENST00000384710 107 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 RNU6-308P-201ENST00000390957 107 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 RNU6-710P-201ENST00000410424 105 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 MCFD2P1-201ENST00000417812 300 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 AL162725.1-201ENST00000435405 301 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 RPS29P1-201ENST00000465274 159 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 OR9P1P-201ENST00000496431 281 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 AL358944.1-201ENST00000528537 144 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 MIR8065-201ENST00000620577 100 ntBASIC1.36□□□□□ -2.19
LIMK1P53667 RNU6-199P-201ENST00000362954 107 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 Y_RNA.205-201ENST00000364128 113 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 Y_RNA.462-201ENST00000384268 102 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 Y_RNA.570-201ENST00000384750 101 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 RNU6-1105P-201ENST00000384774 107 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 RNU6-855P-201ENST00000410395 104 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 AC093850.1-201ENST00000454121 251 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 SNORA25.10-201ENST00000515926 124 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 CYP3A52P-201ENST00000563326 91 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 AL050343.2-201ENST00000607338 280 ntBASIC1.35□□□□□ -2.19
LIMK1P53667 RNU4-41P-201ENST00000364426 143 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 Y_RNA.460-201ENST00000384255 102 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 RNU6-937P-201ENST00000384325 106 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 RNU6-424P-201ENST00000384367 105 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 RNU6-163P-201ENST00000384396 106 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 SNORD116-13-201ENST00000384408 92 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 SNORA12.1-201ENST00000390873 148 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 MIR548J-201ENST00000408833 112 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 RNU2-61P-201ENST00000411069 191 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 SNRPGP13-201ENST00000442212 177 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 COX6CP14-201ENST00000469580 174 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 AC093852.1-201ENST00000503587 266 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 RNU6-966P-201ENST00000516479 104 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 RN7SKP88-201ENST00000516847 250 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 AL512310.8-201ENST00000550183 120 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 C8orf59P2-201ENST00000603441 271 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 AC124312.5-201ENST00000604451 268 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 7SK.8-201ENST00000612110 250 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 7SK.11-201ENST00000615477 250 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 7SK.13-201ENST00000622040 250 ntBASIC1.34□□□□□ -2.19
LIMK1P53667 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.34□□□□□ -2.19
LIMK1P53667 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.33□□□□□ -2.2
LIMK1P53667 Y_RNA.361-201ENST00000365515 120 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 MIR1302-11-201ENST00000408051 138 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 MIR1302-9-201ENST00000408365 138 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 MIR1302-10-201ENST00000408734 138 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 RNU4-30P-201ENST00000410245 143 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 MLLT10P1-201ENST00000418346 262 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 Z98949.2-201ENST00000440996 144 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 RPL39P38-201ENST00000467018 153 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 RNU6-322P-201ENST00000516010 103 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 RNU6-475P-201ENST00000516073 104 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 RNU6-922P-201ENST00000516753 99 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 AC005972.2-201ENST00000604690 348 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 MIR1302-2-201ENST00000607096 138 ntBASIC1.33□□□□□ -2.2
LIMK1P53667 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.33□□□□□ -2.2
LIMK1P53667 Y_RNA.172-201ENST00000363765 102 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 Y_RNA.341-201ENST00000365341 102 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 Y_RNA.393-201ENST00000383936 102 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 Y_RNA.395-201ENST00000383945 109 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 Y_RNA.509-201ENST00000384506 99 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
LIMK1P53667 MTND4P19-201ENST00000446659 478 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 RNU6-947P-201ENST00000516264 106 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 RNU6-988P-201ENST00000519081 107 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LIMK1P53667 AC022616.4-201ENST00000522985 181 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 MIR3664-201ENST00000579074 99 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 AL513534.2-201ENST00000603836 250 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 AL160413.1-201ENST00000622780 310 ntBASIC1.32□□□□□ -2.2
LIMK1P53667 Y_RNA.31-201ENST00000362574 102 ntBASIC1.31□□□□□ -2.2
LIMK1P53667 Y_RNA.551-201ENST00000384661 102 ntBASIC1.31□□□□□ -2.2
LIMK1P53667 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
LIMK1P53667 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.31□□□□□ -2.2
LIMK1P53667 RPS20P10-201ENST00000451209 253 ntBASIC1.31□□□□□ -2.2
LIMK1P53667 AC023790.1-201ENST00000482174 347 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms