Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
COL4A4P53420 RNA5SP62-201ENST00000363457 110 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 RNU6-884P-201ENST00000363889 107 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 Y_RNA.218-201ENST00000364218 104 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 Y_RNA.368-201ENST00000365547 113 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 RNU6-417P-201ENST00000384712 107 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 MIR626-201ENST00000385032 94 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 MT-TT-201ENST00000387460 66 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 RNU6-578P-201ENST00000390980 103 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 Y_RNA.586-201ENST00000391146 98 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 AC096649.2-201ENST00000416186 393 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.42□□□□□ -2.18
COL4A4P53420 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A4P53420 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.42□□□□□ -2.18
COL4A4P53420 RNU5F-8P-201ENST00000515941 111 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 SNORA31.16-201ENST00000516773 139 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 RNU6-453P-201ENST00000516819 85 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 AC112693.2-201ENST00000556538 232 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 CYP4A27P-201ENST00000567218 190 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 AC090616.3-201ENST00000582184 217 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 AC007229.1-201ENST00000590455 412 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 SNORA67.1-201ENST00000364749 141 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 RNU6-449P-201ENST00000383914 107 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 Y_RNA.542-201ENST00000384641 111 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 AL031183.1-201ENST00000457667 207 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.42□□□□□ -2.18
COL4A4P53420 RNU6-1211P-201ENST00000459179 105 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 SCARNA8-201ENST00000515924 131 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 RNU6-919P-201ENST00000516731 104 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.42□□□□□ -2.18
COL4A4P53420 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.42□□□□□ -2.18
COL4A4P53420 MIR3923-201ENST00000579521 83 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 MIR5688-201ENST00000580619 83 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 MIR3136-201ENST00000583498 78 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 AC012640.5-201ENST00000623897 319 ntBASIC1.42□□□□□ -2.18
COL4A4P53420 CENPCP1-201ENST00000533085 2578 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
COL4A4P53420 RNA5SP257-201ENST00000363023 116 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 RNU4-80P-201ENST00000363200 141 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 Y_RNA.121-201ENST00000363309 113 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 RNU6-899P-201ENST00000363947 107 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 Y_RNA.243-201ENST00000364481 109 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 SNORA36A-201ENST00000384221 132 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 SNORA8.3-201ENST00000384679 139 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 MIR549A-201ENST00000385268 96 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 SNORA40-201ENST00000388090 126 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 RNA5SP201-201ENST00000410316 124 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 RPS26P42-201ENST00000413485 326 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 AC138623.1-201ENST00000418060 216 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 BTF3P11-201ENST00000426582 477 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 MTND4LP9-201ENST00000427694 174 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 AL714022.1-201ENST00000439897 151 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.41□□□□□ -2.18
COL4A4P53420 AC008267.6-201ENST00000441664 139 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 AC114982.1-201ENST00000469402 321 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 RNU2-12P-201ENST00000517216 168 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 DEFB131C-201ENST00000528817 165 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 RNU6-91P-201ENST00000607774 107 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 PCGEM1.1-201ENST00000613431 131 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 AL365222.1-201ENST00000614661 98 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 TCL6_2.1-201ENST00000615162 119 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 MTND1P7-201ENST00000632801 297 ntBASIC1.41□□□□□ -2.18
COL4A4P53420 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.41□□□□□ -2.18
COL4A4P53420 AC010329.5-201ENST00000623497 2174 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 RNU1-62P-201ENST00000362599 164 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 RNU6-727P-201ENST00000363592 107 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 Y_RNA.273-201ENST00000364703 102 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 RNU6-793P-201ENST00000384233 104 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 MIR493-201ENST00000385254 89 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 SNORA26.3-201ENST00000391119 136 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 MIR320B2-201ENST00000408479 138 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 RNU6-710P-201ENST00000410424 105 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 RPL26P27-201ENST00000414397 437 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 EBAG9P1-201ENST00000418955 543 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 AC099548.1-201ENST00000421443 426 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 RPL39P29-201ENST00000447779 157 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 HMGN2P10-201ENST00000448085 265 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 RNU6-191P-201ENST00000516295 94 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 RNU6-313P-201ENST00000516317 112 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 SNORD19.2-201ENST00000516978 73 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 AC100767.1-201ENST00000528178 123 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.4□□□□□ -2.19
COL4A4P53420 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A4P53420 AC008873.1-201ENST00000625051 138 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 AC134026.1-201ENST00000623249 2239 ntBASIC1.4□□□□□ -2.19
COL4A4P53420 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.4□□□□□ -2.19
COL4A4P53420 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL4A4P53420 Y_RNA.341-201ENST00000365341 102 ntBASIC1.39□□□□□ -2.19
COL4A4P53420 RNU6-728P-201ENST00000365375 104 ntBASIC1.39□□□□□ -2.19
COL4A4P53420 RNU4-17P-201ENST00000365598 141 ntBASIC1.39□□□□□ -2.19
COL4A4P53420 SNORD116-18-201ENST00000383961 92 ntBASIC1.39□□□□□ -2.19
COL4A4P53420 SNORA6-201ENST00000384033 151 ntBASIC1.39□□□□□ -2.19
COL4A4P53420 Y_RNA.456-201ENST00000384232 111 ntBASIC1.39□□□□□ -2.19
COL4A4P53420 RNU6-376P-201ENST00000384731 106 ntBASIC1.39□□□□□ -2.19
COL4A4P53420 RNU6-763P-201ENST00000390865 106 ntBASIC1.39□□□□□ -2.19
COL4A4P53420 U3.40-201ENST00000408706 208 ntBASIC1.39□□□□□ -2.19
COL4A4P53420 RNU6-588P-201ENST00000410281 105 ntBASIC1.39□□□□□ -2.19
COL4A4P53420 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms