Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR548F4-201ENST00000408515 105 ntBASIC1.49□□□□□ -2.17
PDX1P52945 AC009474.2-201ENST00000451383 136 ntBASIC1.49□□□□□ -2.17
PDX1P52945 AC233266.1-201ENST00000454518 96 ntBASIC1.49□□□□□ -2.17
PDX1P52945 HMGN1P10-201ENST00000474557 553 ntBASIC1.49□□□□□ -2.17
PDX1P52945 SCARNA15.1-201ENST00000516384 125 ntBASIC1.49□□□□□ -2.17
PDX1P52945 RNU2-56P-201ENST00000516826 190 ntBASIC1.49□□□□□ -2.17
PDX1P52945 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.49□□□□□ -2.17
PDX1P52945 AL442663.2-201ENST00000554385 511 ntBASIC1.49□□□□□ -2.17
PDX1P52945 AL360085.1-201ENST00000604713 532 ntBASIC1.49□□□□□ -2.17
PDX1P52945 AC242852.1-201ENST00000612151 96 ntBASIC1.49□□□□□ -2.17
PDX1P52945 AC007742.2-201ENST00000618226 398 ntBASIC1.49□□□□□ -2.17
PDX1P52945 AC244015.1-201ENST00000622301 99 ntBASIC1.49□□□□□ -2.17
PDX1P52945 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PDX1P52945 MIR302D-201ENST00000362275 68 ntBASIC1.48□□□□□ -2.17
PDX1P52945 RNU6-1048P-201ENST00000364054 107 ntBASIC1.48□□□□□ -2.17
PDX1P52945 Y_RNA.341-201ENST00000365341 102 ntBASIC1.48□□□□□ -2.17
PDX1P52945 RNU6-338P-201ENST00000383888 105 ntBASIC1.48□□□□□ -2.17
PDX1P52945 Y_RNA.508-201ENST00000384502 114 ntBASIC1.48□□□□□ -2.17
PDX1P52945 RNU6-950P-201ENST00000384651 107 ntBASIC1.48□□□□□ -2.17
PDX1P52945 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
PDX1P52945 RNU6-710P-201ENST00000410424 105 ntBASIC1.48□□□□□ -2.17
PDX1P52945 RN7SKP200-201ENST00000410564 320 ntBASIC1.48□□□□□ -2.17
PDX1P52945 MTCO1P5-201ENST00000433573 344 ntBASIC1.48□□□□□ -2.17
PDX1P52945 AL731563.1-201ENST00000442202 214 ntBASIC1.48□□□□□ -2.17
PDX1P52945 DYNLT3P2-201ENST00000442517 295 ntBASIC1.48□□□□□ -2.17
PDX1P52945 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.48□□□□□ -2.17
PDX1P52945 OR9P1P-201ENST00000496431 281 ntBASIC1.48□□□□□ -2.17
PDX1P52945 AC008834.1-201ENST00000511612 175 ntBASIC1.48□□□□□ -2.17
PDX1P52945 AP002004.2-201ENST00000531656 154 ntBASIC1.48□□□□□ -2.17
PDX1P52945 MIR3198-2-201ENST00000577868 80 ntBASIC1.48□□□□□ -2.17
PDX1P52945 MIR4421-201ENST00000578133 69 ntBASIC1.48□□□□□ -2.17
PDX1P52945 MIR4719-201ENST00000585233 84 ntBASIC1.48□□□□□ -2.17
PDX1P52945 AC068647.2-201ENST00000637380 353 ntBASIC1.48□□□□□ -2.17
PDX1P52945 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PDX1P52945 Y_RNA.84-201ENST00000363011 104 ntBASIC1.47□□□□□ -2.17
PDX1P52945 Y_RNA.136-201ENST00000363444 102 ntBASIC1.47□□□□□ -2.17
PDX1P52945 Y_RNA.152-201ENST00000363578 100 ntBASIC1.47□□□□□ -2.17
PDX1P52945 Y_RNA.569-201ENST00000384749 103 ntBASIC1.47□□□□□ -2.17
PDX1P52945 RNU2-14P-201ENST00000411053 191 ntBASIC1.47□□□□□ -2.17
PDX1P52945 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.47□□□□□ -2.17
PDX1P52945 CALM2P4-201ENST00000430810 426 ntBASIC1.47□□□□□ -2.17
PDX1P52945 RNU6-191P-201ENST00000516295 94 ntBASIC1.47□□□□□ -2.17
PDX1P52945 RNU6-635P-201ENST00000516651 102 ntBASIC1.47□□□□□ -2.17
PDX1P52945 RNU6-570P-201ENST00000517051 105 ntBASIC1.47□□□□□ -2.17
PDX1P52945 AL161670.1-201ENST00000554348 137 ntBASIC1.47□□□□□ -2.17
PDX1P52945 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.47□□□□□ -2.17
PDX1P52945 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.47□□□□□ -2.17
PDX1P52945 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PDX1P52945 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PDX1P52945 RNU4-41P-201ENST00000364426 143 ntBASIC1.46□□□□□ -2.18
PDX1P52945 Y_RNA.265-201ENST00000364677 108 ntBASIC1.46□□□□□ -2.18
PDX1P52945 Y_RNA.355-201ENST00000365462 98 ntBASIC1.46□□□□□ -2.18
PDX1P52945 Y_RNA.456-201ENST00000384232 111 ntBASIC1.46□□□□□ -2.18
PDX1P52945 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
PDX1P52945 RNU6-1109P-201ENST00000391187 107 ntBASIC1.46□□□□□ -2.18
PDX1P52945 RNU11-5P-201ENST00000391216 129 ntBASIC1.46□□□□□ -2.18
PDX1P52945 AL034345.1-201ENST00000407768 123 ntBASIC1.46□□□□□ -2.18
PDX1P52945 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.46□□□□□ -2.18
PDX1P52945 FTH1P12-201ENST00000432137 551 ntBASIC1.46□□□□□ -2.18
PDX1P52945 AC104332.1-201ENST00000440471 797 ntBASIC1.46□□□□□ -2.18
PDX1P52945 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.46□□□□□ -2.18
PDX1P52945 SNORA44.1-201ENST00000517031 108 ntBASIC1.46□□□□□ -2.18
PDX1P52945 AC011604.1-201ENST00000545978 196 ntBASIC1.46□□□□□ -2.18
PDX1P52945 AC015688.6-201ENST00000577737 104 ntBASIC1.46□□□□□ -2.18
PDX1P52945 AC008737.2-201ENST00000599446 118 ntBASIC1.46□□□□□ -2.18
PDX1P52945 AC005972.2-201ENST00000604690 348 ntBASIC1.46□□□□□ -2.18
PDX1P52945 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PDX1P52945 MIR8063-201ENST00000621930 81 ntBASIC1.46□□□□□ -2.18
PDX1P52945 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PDX1P52945 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
PDX1P52945 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.46□□□□□ -2.18
PDX1P52945 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
PDX1P52945 ICE2P2-201ENST00000483823 2787 ntBASIC1.45□□□□□ -2.18
PDX1P52945 Y_RNA.145-201ENST00000363527 102 ntBASIC1.45□□□□□ -2.18
PDX1P52945 SNORA7.1-201ENST00000363750 139 ntBASIC1.45□□□□□ -2.18
PDX1P52945 RNU6-801P-201ENST00000364087 105 ntBASIC1.45□□□□□ -2.18
PDX1P52945 Y_RNA.796-201ENST00000364268 102 ntBASIC1.45□□□□□ -2.18
PDX1P52945 Y_RNA.269-201ENST00000364685 89 ntBASIC1.45□□□□□ -2.18
PDX1P52945 Y_RNA.799-201ENST00000364992 102 ntBASIC1.45□□□□□ -2.18
PDX1P52945 SNORA26.5-201ENST00000391215 123 ntBASIC1.45□□□□□ -2.18
PDX1P52945 MIR1276-201ENST00000408707 83 ntBASIC1.45□□□□□ -2.18
PDX1P52945 Y_RNA.621-201ENST00000411065 96 ntBASIC1.45□□□□□ -2.18
PDX1P52945 PGBD4P5-201ENST00000445958 426 ntBASIC1.45□□□□□ -2.18
PDX1P52945 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
PDX1P52945 snoU13.9-201ENST00000458927 103 ntBASIC1.45□□□□□ -2.18
PDX1P52945 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.45□□□□□ -2.18
PDX1P52945 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
PDX1P52945 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.45□□□□□ -2.18
PDX1P52945 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.45□□□□□ -2.18
PDX1P52945 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
PDX1P52945 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
PDX1P52945 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
PDX1P52945 MIRLET7C-201ENST00000362160 84 ntBASIC1.44□□□□□ -2.18
PDX1P52945 Y_RNA.118-201ENST00000363300 101 ntBASIC1.44□□□□□ -2.18
PDX1P52945 RNU6-424P-201ENST00000384367 105 ntBASIC1.44□□□□□ -2.18
PDX1P52945 MIR562-201ENST00000384894 95 ntBASIC1.44□□□□□ -2.18
PDX1P52945 MIR513A1-201ENST00000385138 129 ntBASIC1.44□□□□□ -2.18
PDX1P52945 U8.16-201ENST00000391279 133 ntBASIC1.44□□□□□ -2.18
PDX1P52945 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.44□□□□□ -2.18
PDX1P52945 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms