Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 Y_RNA.571-201ENST00000384753 98 ntBASIC2.43□□□□□ -2.02
NEK4P51957 MIR520A-201ENST00000384862 85 ntBASIC2.43□□□□□ -2.02
NEK4P51957 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
NEK4P51957 RNA5SP496-201ENST00000391240 109 ntBASIC2.43□□□□□ -2.02
NEK4P51957 MIR1278-201ENST00000408753 81 ntBASIC2.43□□□□□ -2.02
NEK4P51957 RNA5SP100-201ENST00000410903 110 ntBASIC2.43□□□□□ -2.02
NEK4P51957 RNA5SP59-201ENST00000410922 110 ntBASIC2.43□□□□□ -2.02
NEK4P51957 RN7SKP101-201ENST00000411376 320 ntBASIC2.43□□□□□ -2.02
NEK4P51957 PIGPP3-201ENST00000425307 415 ntBASIC2.43□□□□□ -2.02
NEK4P51957 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.43□□□□□ -2.02
NEK4P51957 AC011753.1-201ENST00000451001 220 ntBASIC2.43□□□□□ -2.02
NEK4P51957 AL049830.1-201ENST00000468034 425 ntBASIC2.43□□□□□ -2.02
NEK4P51957 SCARNA8-201ENST00000515924 131 ntBASIC2.43□□□□□ -2.02
NEK4P51957 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.43□□□□□ -2.02
NEK4P51957 SNORD53-201ENST00000579969 78 ntBASIC2.43□□□□□ -2.02
NEK4P51957 MIR4672-201ENST00000583126 81 ntBASIC2.43□□□□□ -2.02
NEK4P51957 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.43□□□□□ -2.02
NEK4P51957 MIR8054-201ENST00000620877 86 ntBASIC2.43□□□□□ -2.02
NEK4P51957 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.43□□□□□ -2.02
NEK4P51957 MIR6873-201ENST00000622788 63 ntBASIC2.43□□□□□ -2.02
NEK4P51957 Y_RNA.796-201ENST00000364268 102 ntBASIC2.42□□□□□ -2.02
NEK4P51957 Y_RNA.233-201ENST00000364407 101 ntBASIC2.42□□□□□ -2.02
NEK4P51957 RNU4-41P-201ENST00000364426 143 ntBASIC2.42□□□□□ -2.02
NEK4P51957 Y_RNA.238-201ENST00000364441 102 ntBASIC2.42□□□□□ -2.02
NEK4P51957 SNORA16B-201ENST00000364674 135 ntBASIC2.42□□□□□ -2.02
NEK4P51957 Y_RNA.799-201ENST00000364992 102 ntBASIC2.42□□□□□ -2.02
NEK4P51957 RNU6-301P-201ENST00000384277 107 ntBASIC2.42□□□□□ -2.02
NEK4P51957 MIR616-201ENST00000385293 97 ntBASIC2.42□□□□□ -2.02
NEK4P51957 AL512604.1-201ENST00000404812 257 ntBASIC2.42□□□□□ -2.02
NEK4P51957 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.42□□□□□ -2.02
NEK4P51957 SNORA31.10-201ENST00000516482 106 ntBASIC2.42□□□□□ -2.02
NEK4P51957 RNU2-56P-201ENST00000516826 190 ntBASIC2.42□□□□□ -2.02
NEK4P51957 AC022559.1-201ENST00000520905 205 ntBASIC2.42□□□□□ -2.02
NEK4P51957 IGKV3-31-201ENST00000523109 329 ntBASIC2.42□□□□□ -2.02
NEK4P51957 AL021707.8-201ENST00000609428 183 ntBASIC2.42□□□□□ -2.02
NEK4P51957 FTX_2.1-201ENST00000618816 94 ntBASIC2.42□□□□□ -2.02
NEK4P51957 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.42□□□□□ -2.02
NEK4P51957 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
NEK4P51957 RNU6-1209P-201ENST00000363655 107 ntBASIC2.41□□□□□ -2.02
NEK4P51957 RNU6-103P-201ENST00000363686 107 ntBASIC2.41□□□□□ -2.02
NEK4P51957 Y_RNA.253-201ENST00000364562 112 ntBASIC2.41□□□□□ -2.02
NEK4P51957 RNU6-440P-201ENST00000390882 105 ntBASIC2.41□□□□□ -2.02
NEK4P51957 RNU2-2P-201ENST00000410396 191 ntBASIC2.41□□□□□ -2.02
NEK4P51957 HMGN1P7-201ENST00000491722 313 ntBASIC2.41□□□□□ -2.02
NEK4P51957 RNU6-453P-201ENST00000516819 85 ntBASIC2.41□□□□□ -2.02
NEK4P51957 RNA5SP437-201ENST00000517249 129 ntBASIC2.41□□□□□ -2.02
NEK4P51957 RNU2-4P-201ENST00000606190 192 ntBASIC2.41□□□□□ -2.02
NEK4P51957 AL391903.3-201ENST00000612158 163 ntBASIC2.41□□□□□ -2.02
NEK4P51957 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
NEK4P51957 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
NEK4P51957 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NEK4P51957 SNORA67.3-201ENST00000384366 140 ntBASIC2.4□□□□□ -2.03
NEK4P51957 RNU4-70P-201ENST00000384579 139 ntBASIC2.4□□□□□ -2.03
NEK4P51957 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.4□□□□□ -2.03
NEK4P51957 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.4□□□□□ -2.03
NEK4P51957 AC245047.8-201ENST00000456455 284 ntBASIC2.4□□□□□ -2.03
NEK4P51957 RPL23AP91-201ENST00000569211 455 ntBASIC2.4□□□□□ -2.03
NEK4P51957 MIR5089-201ENST00000580047 84 ntBASIC2.4□□□□□ -2.03
NEK4P51957 MIR4513-201ENST00000581077 86 ntBASIC2.4□□□□□ -2.03
NEK4P51957 MIR4435-1-201ENST00000582552 80 ntBASIC2.4□□□□□ -2.03
NEK4P51957 Y_RNA.783-201ENST00000613546 102 ntBASIC2.4□□□□□ -2.03
NEK4P51957 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
NEK4P51957 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
NEK4P51957 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.4□□□□□ -2.03
NEK4P51957 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
NEK4P51957 ZNF702P-202ENST00000434269 1966 ntBASIC2.4□□□□□ -2.03
NEK4P51957 RNU6-682P-201ENST00000363843 106 ntBASIC2.39□□□□□ -2.03
NEK4P51957 SNORD11-201ENST00000459124 84 ntBASIC2.39□□□□□ -2.03
NEK4P51957 RNU7-28P-201ENST00000516759 62 ntBASIC2.39□□□□□ -2.03
NEK4P51957 MIR4744-201ENST00000581563 82 ntBASIC2.39□□□□□ -2.03
NEK4P51957 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.39□□□□□ -2.03
NEK4P51957 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NEK4P51957 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
NEK4P51957 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NEK4P51957 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NEK4P51957 RNU4-82P-201ENST00000362443 140 ntBASIC2.38□□□□□ -2.03
NEK4P51957 RNA5SP276-201ENST00000362580 94 ntBASIC2.38□□□□□ -2.03
NEK4P51957 SNORA4.2-201ENST00000365313 147 ntBASIC2.38□□□□□ -2.03
NEK4P51957 RNU6-950P-201ENST00000384651 107 ntBASIC2.38□□□□□ -2.03
NEK4P51957 SNORA64-201ENST00000384674 134 ntBASIC2.38□□□□□ -2.03
NEK4P51957 MT-TT-201ENST00000387460 66 ntBASIC2.38□□□□□ -2.03
NEK4P51957 RNU2-7P-201ENST00000410794 178 ntBASIC2.38□□□□□ -2.03
NEK4P51957 RPL23AP63-201ENST00000498752 471 ntBASIC2.38□□□□□ -2.03
NEK4P51957 RNU6-861P-201ENST00000516745 106 ntBASIC2.38□□□□□ -2.03
NEK4P51957 SNRPGP19-201ENST00000603826 189 ntBASIC2.38□□□□□ -2.03
NEK4P51957 JPX_2.1-201ENST00000614161 69 ntBASIC2.38□□□□□ -2.03
NEK4P51957 AL591926.4-201ENST00000616895 298 ntBASIC2.38□□□□□ -2.03
NEK4P51957 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.38□□□□□ -2.03
NEK4P51957 U6.106-201ENST00000636360 105 ntBASIC2.38□□□□□ -2.03
NEK4P51957 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.37□□□□□ -2.03
NEK4P51957 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NEK4P51957 RNY3P5-201ENST00000384127 102 ntBASIC2.37□□□□□ -2.03
NEK4P51957 Y_RNA.555-201ENST00000384673 110 ntBASIC2.37□□□□□ -2.03
NEK4P51957 RNU6-1228P-201ENST00000391014 107 ntBASIC2.37□□□□□ -2.03
NEK4P51957 RNA5SP482-201ENST00000391269 118 ntBASIC2.37□□□□□ -2.03
NEK4P51957 MIR548I3-201ENST00000408378 149 ntBASIC2.37□□□□□ -2.03
NEK4P51957 MIR548I1-201ENST00000408810 149 ntBASIC2.37□□□□□ -2.03
NEK4P51957 RN7SKP200-201ENST00000410564 320 ntBASIC2.37□□□□□ -2.03
NEK4P51957 AL158823.1-201ENST00000418441 478 ntBASIC2.37□□□□□ -2.03
NEK4P51957 HSPE1P9-201ENST00000440046 311 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms