Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CHRNA4P43681 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHRNA4P43681 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHRNA4P43681 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.26□□□□□ -1.89
CHRNA4P43681 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CHRNA4P43681 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.26□□□□□ -1.89
CHRNA4P43681 RNU6-743P-201ENST00000364151 106 ntBASIC3.25□□□□□ -1.89
CHRNA4P43681 AC005326.1-201ENST00000429197 123 ntBASIC3.25□□□□□ -1.89
CHRNA4P43681 SNORD36C-201ENST00000516733 66 ntBASIC3.25□□□□□ -1.89
CHRNA4P43681 MIR4513-201ENST00000581077 86 ntBASIC3.25□□□□□ -1.89
CHRNA4P43681 AC005000.2-201ENST00000605468 310 ntBASIC3.25□□□□□ -1.89
CHRNA4P43681 AC090115.4-201ENST00000609970 188 ntBASIC3.25□□□□□ -1.89
CHRNA4P43681 AC006441.5-201ENST00000612680 209 ntBASIC3.25□□□□□ -1.89
CHRNA4P43681 AC091932.4-201ENST00000623386 200 ntBASIC3.25□□□□□ -1.89
CHRNA4P43681 AC095038.3-201ENST00000634439 195 ntBASIC3.25□□□□□ -1.89
CHRNA4P43681 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.25□□□□□ -1.89
CHRNA4P43681 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
CHRNA4P43681 RNU6-633P-201ENST00000362612 103 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 SNORD58A-201ENST00000383875 65 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 Y_RNA.430-201ENST00000384081 110 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 RNU6-1201P-201ENST00000384227 107 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 RNVU1-14-201ENST00000384770 164 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 snoU13.28-201ENST00000459235 104 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 RNU7-80P-201ENST00000459562 61 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 RPL36AP48-201ENST00000485521 314 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 AC006445.1-201ENST00000491925 405 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 RNU7-25P-201ENST00000516544 62 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 Y_RNA.714-201ENST00000517065 90 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHRNA4P43681 MIR4439-201ENST00000583746 80 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 AC145423.2-201ENST00000610631 239 ntBASIC3.24□□□□□ -1.89
CHRNA4P43681 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHRNA4P43681 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CHRNA4P43681 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHRNA4P43681 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CHRNA4P43681 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA4P43681 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA4P43681 Y_RNA.351-201ENST00000365436 96 ntBASIC3.23□□□□□ -1.89
CHRNA4P43681 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CHRNA4P43681 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.23□□□□□ -1.89
CHRNA4P43681 RNA5SP310-201ENST00000459084 116 ntBASIC3.23□□□□□ -1.89
CHRNA4P43681 HSPE1P19-201ENST00000603327 295 ntBASIC3.23□□□□□ -1.89
CHRNA4P43681 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.23□□□□□ -1.89
CHRNA4P43681 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
CHRNA4P43681 MIR7153-201ENST00000637758 57 ntBASIC3.23□□□□□ -1.89
CHRNA4P43681 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHRNA4P43681 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA4P43681 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA4P43681 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHRNA4P43681 RNU4-16P-201ENST00000364737 141 ntBASIC3.22□□□□□ -1.89
CHRNA4P43681 U8.15-201ENST00000390947 134 ntBASIC3.22□□□□□ -1.89
CHRNA4P43681 RNA5SP144-201ENST00000410846 116 ntBASIC3.22□□□□□ -1.89
CHRNA4P43681 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.22□□□□□ -1.89
CHRNA4P43681 AC114801.3-201ENST00000510231 177 ntBASIC3.22□□□□□ -1.89
CHRNA4P43681 AC091544.4-201ENST00000555268 342 ntBASIC3.22□□□□□ -1.89
CHRNA4P43681 MIR7112-201ENST00000616126 65 ntBASIC3.22□□□□□ -1.89
CHRNA4P43681 MIR6076-201ENST00000617521 113 ntBASIC3.22□□□□□ -1.89
CHRNA4P43681 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.22□□□□□ -1.89
CHRNA4P43681 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.22□□□□□ -1.89
CHRNA4P43681 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
CHRNA4P43681 AC018630.2-201ENST00000534866 2403 ntBASIC3.22□□□□□ -1.89
CHRNA4P43681 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.22□□□□□ -1.89
CHRNA4P43681 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.22□□□□□ -1.89
CHRNA4P43681 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.21□□□□□ -1.89
CHRNA4P43681 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHRNA4P43681 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHRNA4P43681 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.21□□□□□ -1.9
CHRNA4P43681 MIR126-201ENST00000362291 85 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 RNU6-616P-201ENST00000384353 107 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 Y_RNA.547-201ENST00000384654 119 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 MIR802-201ENST00000390235 94 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 SNORA7.5-201ENST00000410672 110 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 AL445646.1-201ENST00000431784 216 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 FTH1P12-201ENST00000432137 551 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 AC233266.1-201ENST00000454518 96 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 RPL23AP63-201ENST00000498752 471 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 RNU6-1291P-201ENST00000516591 104 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 AC004812.1-201ENST00000540773 146 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 AC078899.2-201ENST00000595282 212 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 AL513534.2-201ENST00000603836 250 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 AC242852.1-201ENST00000612151 96 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 uc_338.14-201ENST00000613162 166 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 AC244015.1-201ENST00000622301 99 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 AC090517.3-201ENST00000625170 141 ntBASIC3.21□□□□□ -1.9
CHRNA4P43681 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
CHRNA4P43681 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHRNA4P43681 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHRNA4P43681 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.2□□□□□ -1.9
CHRNA4P43681 Y_RNA.545-201ENST00000384652 105 ntBASIC3.2□□□□□ -1.9
CHRNA4P43681 MIR522-201ENST00000385071 87 ntBASIC3.2□□□□□ -1.9
CHRNA4P43681 RNU1-101P-201ENST00000391171 127 ntBASIC3.2□□□□□ -1.9
CHRNA4P43681 RNU11-5P-201ENST00000391216 129 ntBASIC3.2□□□□□ -1.9
CHRNA4P43681 AC025750.2-201ENST00000442609 450 ntBASIC3.2□□□□□ -1.9
CHRNA4P43681 AP001486.1-201ENST00000463339 476 ntBASIC3.2□□□□□ -1.9
CHRNA4P43681 AL358944.1-201ENST00000528537 144 ntBASIC3.2□□□□□ -1.9
CHRNA4P43681 AC002984.1-201ENST00000591692 448 ntBASIC3.2□□□□□ -1.9
CHRNA4P43681 AC002076.2-201ENST00000617362 122 ntBASIC3.2□□□□□ -1.9
CHRNA4P43681 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms