Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SNORD68-201ENST00000363214 84 ntBASIC0.87□□□□□ -2.27
RFC4P35249 Y_RNA.166-201ENST00000363730 102 ntBASIC0.87□□□□□ -2.27
RFC4P35249 MIR526A1-201ENST00000384897 85 ntBASIC0.87□□□□□ -2.27
RFC4P35249 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.87□□□□□ -2.27
RFC4P35249 MIR2355-201ENST00000517199 87 ntBASIC0.87□□□□□ -2.27
RFC4P35249 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.87□□□□□ -2.27
RFC4P35249 MIR5690-201ENST00000583739 73 ntBASIC0.87□□□□□ -2.27
RFC4P35249 AC011476.5-201ENST00000615594 130 ntBASIC0.87□□□□□ -2.27
RFC4P35249 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RFC4P35249 Y_RNA.172-201ENST00000363765 102 ntBASIC0.86□□□□□ -2.27
RFC4P35249 Y_RNA.258-201ENST00000364613 105 ntBASIC0.86□□□□□ -2.27
RFC4P35249 RNU6-163P-201ENST00000384396 106 ntBASIC0.86□□□□□ -2.27
RFC4P35249 SNORD116-13-201ENST00000384408 92 ntBASIC0.86□□□□□ -2.27
RFC4P35249 AC063976.4-201ENST00000421971 163 ntBASIC0.86□□□□□ -2.27
RFC4P35249 AC096644.2-201ENST00000429278 159 ntBASIC0.86□□□□□ -2.27
RFC4P35249 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.86□□□□□ -2.27
RFC4P35249 RNU6-470P-201ENST00000515954 104 ntBASIC0.86□□□□□ -2.27
RFC4P35249 AC022306.2-201ENST00000617563 647 ntBASIC0.86□□□□□ -2.27
RFC4P35249 RNU6-708P-201ENST00000384217 107 ntBASIC0.85□□□□□ -2.27
RFC4P35249 Y_RNA.474-201ENST00000384341 102 ntBASIC0.85□□□□□ -2.27
RFC4P35249 SNORD12-201ENST00000391002 90 ntBASIC0.85□□□□□ -2.27
RFC4P35249 AL031003.1-201ENST00000404229 172 ntBASIC0.85□□□□□ -2.27
RFC4P35249 Y_RNA.605-201ENST00000410577 105 ntBASIC0.85□□□□□ -2.27
RFC4P35249 AL162725.1-201ENST00000435405 301 ntBASIC0.85□□□□□ -2.27
RFC4P35249 AC002429.1-201ENST00000437672 148 ntBASIC0.85□□□□□ -2.27
RFC4P35249 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
RFC4P35249 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
RFC4P35249 RNU6-559P-201ENST00000516151 98 ntBASIC0.85□□□□□ -2.27
RFC4P35249 RNU6-966P-201ENST00000516479 104 ntBASIC0.85□□□□□ -2.27
RFC4P35249 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
RFC4P35249 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.85□□□□□ -2.27
RFC4P35249 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.85□□□□□ -2.27
RFC4P35249 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.27
RFC4P35249 RNU6-626P-201ENST00000363354 107 ntBASIC0.84□□□□□ -2.27
RFC4P35249 RNU6-324P-201ENST00000363957 106 ntBASIC0.84□□□□□ -2.27
RFC4P35249 Y_RNA.314-201ENST00000365114 102 ntBASIC0.84□□□□□ -2.27
RFC4P35249 RNU6-20P-201ENST00000384106 107 ntBASIC0.84□□□□□ -2.27
RFC4P35249 MIR891A-201ENST00000401237 79 ntBASIC0.84□□□□□ -2.27
RFC4P35249 AL358176.2-201ENST00000425769 204 ntBASIC0.84□□□□□ -2.27
RFC4P35249 FCF1P4-201ENST00000448326 183 ntBASIC0.84□□□□□ -2.27
RFC4P35249 SUMO1P2-201ENST00000452524 304 ntBASIC0.84□□□□□ -2.27
RFC4P35249 RPL39P39-201ENST00000455840 151 ntBASIC0.84□□□□□ -2.27
RFC4P35249 SNORD124-201ENST00000459577 104 ntBASIC0.84□□□□□ -2.27
RFC4P35249 RPS26P48-201ENST00000491713 339 ntBASIC0.84□□□□□ -2.27
RFC4P35249 AC114811.1-201ENST00000507207 168 ntBASIC0.84□□□□□ -2.27
RFC4P35249 SNORD79.1-201ENST00000516069 84 ntBASIC0.84□□□□□ -2.27
RFC4P35249 AL358944.1-201ENST00000528537 144 ntBASIC0.84□□□□□ -2.27
RFC4P35249 AC120024.3-201ENST00000603167 156 ntBASIC0.84□□□□□ -2.27
RFC4P35249 AC006380.1-201ENST00000603598 186 ntBASIC0.84□□□□□ -2.27
RFC4P35249 AL096861.1-201ENST00000610899 123 ntBASIC0.84□□□□□ -2.27
RFC4P35249 AL591926.4-201ENST00000616895 298 ntBASIC0.84□□□□□ -2.27
RFC4P35249 AL008636.1-201ENST00000625038 1018 ntBASIC0.84□□□□□ -2.27
RFC4P35249 MTND4LP32-201ENST00000636111 270 ntBASIC0.84□□□□□ -2.27
RFC4P35249 AL589743.1-201ENST00000551932 2712 ntBASIC0.83□□□□□ -2.28
RFC4P35249 SNORD114-7-201ENST00000362520 77 ntBASIC0.83□□□□□ -2.28
RFC4P35249 Y_RNA.361-201ENST00000365515 120 ntBASIC0.83□□□□□ -2.28
RFC4P35249 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
RFC4P35249 LINC01399-202ENST00000458450 244 ntBASIC0.83□□□□□ -2.28
RFC4P35249 Y_RNA.653-201ENST00000459091 95 ntBASIC0.83□□□□□ -2.28
RFC4P35249 SNORA25.10-201ENST00000515926 124 ntBASIC0.83□□□□□ -2.28
RFC4P35249 RNU7-4P-201ENST00000516961 62 ntBASIC0.83□□□□□ -2.28
RFC4P35249 AC090142.3-201ENST00000519012 385 ntBASIC0.83□□□□□ -2.28
RFC4P35249 AC144568.1-201ENST00000520139 137 ntBASIC0.83□□□□□ -2.28
RFC4P35249 AC005176.2-201ENST00000596933 147 ntBASIC0.83□□□□□ -2.28
RFC4P35249 AL357312.1-201ENST00000603879 298 ntBASIC0.83□□□□□ -2.28
RFC4P35249 AC240442.1-201ENST00000616055 283 ntBASIC0.83□□□□□ -2.28
RFC4P35249 AC243829.3-201ENST00000622177 108 ntBASIC0.83□□□□□ -2.28
RFC4P35249 AC008163.1-202ENST00000636004 2889 ntBASIC0.82□□□□□ -2.28
RFC4P35249 RNU6-833P-201ENST00000363486 107 ntBASIC0.82□□□□□ -2.28
RFC4P35249 Y_RNA.505-201ENST00000384489 102 ntBASIC0.82□□□□□ -2.28
RFC4P35249 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
RFC4P35249 RNU2-54P-201ENST00000410299 190 ntBASIC0.82□□□□□ -2.28
RFC4P35249 RNU6-1199P-201ENST00000411249 104 ntBASIC0.82□□□□□ -2.28
RFC4P35249 MLLT10P1-201ENST00000418346 262 ntBASIC0.82□□□□□ -2.28
RFC4P35249 snoU13.25-201ENST00000458945 104 ntBASIC0.82□□□□□ -2.28
RFC4P35249 CYCTP-201ENST00000504253 315 ntBASIC0.82□□□□□ -2.28
RFC4P35249 PRDX4P1-201ENST00000507189 574 ntBASIC0.82□□□□□ -2.28
RFC4P35249 RNU6-496P-201ENST00000516145 99 ntBASIC0.82□□□□□ -2.28
RFC4P35249 RNU6-155P-201ENST00000516347 100 ntBASIC0.82□□□□□ -2.28
RFC4P35249 AC136628.3-201ENST00000521868 290 ntBASIC0.82□□□□□ -2.28
RFC4P35249 MIR4659A-201ENST00000580269 81 ntBASIC0.82□□□□□ -2.28
RFC4P35249 AC113139.1-201ENST00000605049 239 ntBASIC0.82□□□□□ -2.28
RFC4P35249 Y_RNA.251-201ENST00000364551 99 ntBASIC0.81□□□□□ -2.28
RFC4P35249 Y_RNA.446-201ENST00000384178 104 ntBASIC0.81□□□□□ -2.28
RFC4P35249 RNY3P4-201ENST00000384428 101 ntBASIC0.81□□□□□ -2.28
RFC4P35249 AC098934.3-201ENST00000430450 190 ntBASIC0.81□□□□□ -2.28
RFC4P35249 AC093019.1-201ENST00000443135 252 ntBASIC0.81□□□□□ -2.28
RFC4P35249 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.81□□□□□ -2.28
RFC4P35249 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.81□□□□□ -2.28
RFC4P35249 SNORA70.12-201ENST00000516084 153 ntBASIC0.81□□□□□ -2.28
RFC4P35249 RNU6-1012P-201ENST00000516606 109 ntBASIC0.81□□□□□ -2.28
RFC4P35249 MIR3192-201ENST00000584920 77 ntBASIC0.81□□□□□ -2.28
RFC4P35249 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
RFC4P35249 MIR8087-201ENST00000612745 78 ntBASIC0.81□□□□□ -2.28
RFC4P35249 U2.1-201ENST00000618978 145 ntBASIC0.81□□□□□ -2.28
RFC4P35249 AL109933.3-201ENST00000619095 188 ntBASIC0.81□□□□□ -2.28
RFC4P35249 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RFC4P35249 SNORA80D-201ENST00000384488 135 ntBASIC0.8□□□□□ -2.28
RFC4P35249 MIR516B2-201ENST00000385190 85 ntBASIC0.8□□□□□ -2.28
RFC4P35249 SNORD78.2-201ENST00000391076 69 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms