Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC12P31275 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HOXC12P31275 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC12P31275 SNORD113-1-201ENST00000365321 69 ntBASIC2.6□□□□□ -1.99
HOXC12P31275 RNU6-1138P-201ENST00000365359 106 ntBASIC2.6□□□□□ -1.99
HOXC12P31275 Y_RNA.586-201ENST00000391146 98 ntBASIC2.6□□□□□ -1.99
HOXC12P31275 SNORA26-201ENST00000391286 122 ntBASIC2.6□□□□□ -1.99
HOXC12P31275 MIR548I2-201ENST00000408348 149 ntBASIC2.6□□□□□ -1.99
HOXC12P31275 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC12P31275 AC108938.1-201ENST00000451204 136 ntBASIC2.6□□□□□ -1.99
HOXC12P31275 RN7SL20P-201ENST00000488827 297 ntBASIC2.6□□□□□ -1.99
HOXC12P31275 AC245166.1-201ENST00000521012 253 ntBASIC2.6□□□□□ -1.99
HOXC12P31275 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC12P31275 AC022217.4-201ENST00000604389 163 ntBASIC2.6□□□□□ -1.99
HOXC12P31275 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC12P31275 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC12P31275 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC12P31275 AC062016.1-201ENST00000355719 319 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 SNORD68-201ENST00000363214 84 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 RNU6-1082P-201ENST00000364574 107 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 RNU6-597P-201ENST00000365620 102 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 SNORA46-201ENST00000384762 135 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 SNORA40-201ENST00000388090 126 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 RNA5SP109-201ENST00000391010 116 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 SNORA75.5-201ENST00000391291 81 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 AC245047.3-201ENST00000429428 127 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 AL606517.2-201ENST00000442855 241 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC12P31275 RN7SL297P-201ENST00000483161 293 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 MRPS17P9-201ENST00000511924 393 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 RNU6-126P-201ENST00000516685 103 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 AC084364.2-201ENST00000546924 395 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 MIR5094-201ENST00000578766 85 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 MIR6733-201ENST00000635723 61 ntBASIC2.59□□□□□ -1.99
HOXC12P31275 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.59□□□□□ -1.99
HOXC12P31275 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.59□□□□□ -2
HOXC12P31275 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.59□□□□□ -2
HOXC12P31275 AC096644.4-201ENST00000563417 2912 ntBASIC2.58□□□□□ -2
HOXC12P31275 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.58□□□□□ -2
HOXC12P31275 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HOXC12P31275 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HOXC12P31275 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HOXC12P31275 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
HOXC12P31275 AC073325.2-201ENST00000339545 159 ntBASIC2.58□□□□□ -2
HOXC12P31275 SNORA25.7-201ENST00000364375 127 ntBASIC2.58□□□□□ -2
HOXC12P31275 RNU6-1336P-201ENST00000383886 109 ntBASIC2.58□□□□□ -2
HOXC12P31275 AC245047.4-201ENST00000433189 144 ntBASIC2.58□□□□□ -2
HOXC12P31275 HMGN2P3-201ENST00000433603 273 ntBASIC2.58□□□□□ -2
HOXC12P31275 HMGN2P5-201ENST00000436882 273 ntBASIC2.58□□□□□ -2
HOXC12P31275 RNU6-365P-201ENST00000517113 106 ntBASIC2.58□□□□□ -2
HOXC12P31275 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.58□□□□□ -2
HOXC12P31275 AC069114.2-201ENST00000604699 304 ntBASIC2.58□□□□□ -2
HOXC12P31275 AC245884.12-201ENST00000615364 59 ntBASIC2.58□□□□□ -2
HOXC12P31275 CTSLP2-204ENST00000629029 392 ntBASIC2.58□□□□□ -2
HOXC12P31275 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.57□□□□□ -2
HOXC12P31275 RNU6-978P-201ENST00000364371 103 ntBASIC2.57□□□□□ -2
HOXC12P31275 RNU6-1019P-201ENST00000364424 107 ntBASIC2.57□□□□□ -2
HOXC12P31275 Y_RNA.420-201ENST00000384043 110 ntBASIC2.57□□□□□ -2
HOXC12P31275 RNU6-1117P-201ENST00000384525 104 ntBASIC2.57□□□□□ -2
HOXC12P31275 RNU6-959P-201ENST00000384671 107 ntBASIC2.57□□□□□ -2
HOXC12P31275 MIR518A2-201ENST00000384966 87 ntBASIC2.57□□□□□ -2
HOXC12P31275 SNORD72-201ENST00000390994 80 ntBASIC2.57□□□□□ -2
HOXC12P31275 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.57□□□□□ -2
HOXC12P31275 RNU7-197P-201ENST00000458836 62 ntBASIC2.57□□□□□ -2
HOXC12P31275 AC092991.1-201ENST00000477176 376 ntBASIC2.57□□□□□ -2
HOXC12P31275 RNA5SP82-201ENST00000516707 92 ntBASIC2.57□□□□□ -2
HOXC12P31275 AC090142.3-201ENST00000519012 385 ntBASIC2.57□□□□□ -2
HOXC12P31275 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.57□□□□□ -2
HOXC12P31275 Y_RNA.265-201ENST00000364677 108 ntBASIC2.56□□□□□ -2
HOXC12P31275 Y_RNA.542-201ENST00000384641 111 ntBASIC2.56□□□□□ -2
HOXC12P31275 MIR522-201ENST00000385071 87 ntBASIC2.56□□□□□ -2
HOXC12P31275 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.56□□□□□ -2
HOXC12P31275 RNU6-460P-201ENST00000391158 108 ntBASIC2.56□□□□□ -2
HOXC12P31275 MIR1283-2-201ENST00000408621 87 ntBASIC2.56□□□□□ -2
HOXC12P31275 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.56□□□□□ -2
HOXC12P31275 MTND4LP9-201ENST00000427694 174 ntBASIC2.56□□□□□ -2
HOXC12P31275 FTH1P12-201ENST00000432137 551 ntBASIC2.56□□□□□ -2
HOXC12P31275 RNU6-237P-201ENST00000515985 71 ntBASIC2.56□□□□□ -2
HOXC12P31275 RNA5SP76-201ENST00000516277 87 ntBASIC2.56□□□□□ -2
HOXC12P31275 AC091544.4-201ENST00000555268 342 ntBASIC2.56□□□□□ -2
HOXC12P31275 AC097639.2-201ENST00000603159 172 ntBASIC2.56□□□□□ -2
HOXC12P31275 AC007318.2-201ENST00000620999 243 ntBASIC2.56□□□□□ -2
HOXC12P31275 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HOXC12P31275 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.55□□□□□ -2
HOXC12P31275 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.55□□□□□ -2
HOXC12P31275 RNU6-1084P-201ENST00000362498 107 ntBASIC2.55□□□□□ -2
HOXC12P31275 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.55□□□□□ -2
HOXC12P31275 HMGN2P39-201ENST00000398005 273 ntBASIC2.55□□□□□ -2
HOXC12P31275 RNA5SP508-201ENST00000411327 119 ntBASIC2.55□□□□□ -2
HOXC12P31275 RNA5SP270-201ENST00000411361 118 ntBASIC2.55□□□□□ -2
HOXC12P31275 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.55□□□□□ -2
HOXC12P31275 RN7SKP43-201ENST00000516173 320 ntBASIC2.55□□□□□ -2
HOXC12P31275 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
HOXC12P31275 MIR3605-201ENST00000583214 100 ntBASIC2.55□□□□□ -2
HOXC12P31275 AC008507.4-201ENST00000585464 127 ntBASIC2.55□□□□□ -2
HOXC12P31275 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
HOXC12P31275 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
HOXC12P31275 RNY1P11-201ENST00000363759 113 ntBASIC2.54□□□□□ -2
HOXC12P31275 Y_RNA.291-201ENST00000364886 113 ntBASIC2.54□□□□□ -2
HOXC12P31275 MIR802-201ENST00000390235 94 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 892.4 ms