Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.36□□□□□ -2.35
SLC6A1P30531 SNORD45.4-201ENST00000516629 73 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 AF235103.2-201ENST00000525753 346 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.36□□□□□ -2.35
SLC6A1P30531 AC011195.1-201ENST00000578177 177 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 Z83818.1-201ENST00000603584 150 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 AC004467.1-201ENST00000615678 330 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 AC048344.4-201ENST00000619744 527 ntBASIC0.36□□□□□ -2.35
SLC6A1P30531 RNU6-961P-201ENST00000363893 105 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 RNU4-24P-201ENST00000364565 139 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SLC6A1P30531 RNY1P8-201ENST00000383970 114 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 RNU6-1310P-201ENST00000384153 107 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 MIR193B-201ENST00000384907 83 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 AL031003.1-201ENST00000404229 172 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 MIR548F5-201ENST00000408421 86 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 RNU6-994P-201ENST00000410507 111 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 RNU6-1304P-201ENST00000411374 106 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 RPS3AP52-201ENST00000435639 297 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 AC067940.1-201ENST00000458411 300 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 RNU6-329P-201ENST00000459618 107 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 RPL7P42-201ENST00000481005 679 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 RNU6-408P-201ENST00000515910 100 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 MIR1244-1-201ENST00000612829 85 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 MIR1244-3-201ENST00000635744 85 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 MIR1244-2-201ENST00000636449 85 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 MIR1244-4-202ENST00000636813 85 ntBASIC0.35□□□□□ -2.35
SLC6A1P30531 RNA5SP499-201ENST00000363982 119 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 RNU6-593P-201ENST00000364716 112 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 RNU6-1067P-201ENST00000384752 107 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 SNORD111-201ENST00000408139 94 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 MIR548K-201ENST00000408406 116 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 MIR1827-201ENST00000408549 66 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 RNA5SP95-201ENST00000410319 137 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 MLLT10P1-201ENST00000418346 262 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 AC244023.1-201ENST00000426884 112 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 RNU11-2P-201ENST00000516898 142 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 AC242498.1-201ENST00000604134 111 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 AC243994.1-201ENST00000618627 109 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 MIR6516-201ENST00000630554 81 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.36
SLC6A1P30531 Y_RNA.404-201ENST00000383978 102 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 RNY1P4-201ENST00000384595 115 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 RNU6-1237P-201ENST00000384777 107 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 RNA5SP193-201ENST00000410353 107 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 RNA5SP222-201ENST00000411039 105 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 MRPS18CP6-201ENST00000423587 223 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 MTND3P10-201ENST00000450967 341 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 RNA5SP436-201ENST00000516020 115 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 RNU6-229P-201ENST00000516614 102 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 Y_RNA.708-201ENST00000516950 96 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.33□□□□□ -2.36
SLC6A1P30531 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.33□□□□□ -2.36
SLC6A1P30531 AL136317.1-201ENST00000612653 226 ntBASIC0.33□□□□□ -2.36
SLC6A1P30531 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.33□□□□□ -2.36
SLC6A1P30531 RNU6-1084P-201ENST00000362498 107 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 Y_RNA.101-201ENST00000363154 102 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 SNORD113.3-201ENST00000364630 78 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 SNORD50B-201ENST00000364995 70 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 snoU2-30.1-201ENST00000365012 70 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 RNU6-601P-201ENST00000384540 107 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 MIR7-2-201ENST00000384970 110 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 SNORD105-201ENST00000386910 85 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 RNU2-61P-201ENST00000411069 191 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.32□□□□□ -2.36
SLC6A1P30531 MTND1P4-201ENST00000435196 415 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 MTND2P22-201ENST00000444325 1033 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 AC093534.1-201ENST00000504977 132 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.32□□□□□ -2.36
SLC6A1P30531 AC011352.1-201ENST00000512300 793 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 AC022616.4-201ENST00000522985 181 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 MIR1273G-201ENST00000577677 100 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.32□□□□□ -2.36
SLC6A1P30531 AC240442.1-201ENST00000616055 283 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 AC092794.2-201ENST00000620933 563 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 MIR4251-201ENST00000635819 61 ntBASIC0.32□□□□□ -2.36
SLC6A1P30531 SNORA36.2-201ENST00000384004 127 ntBASIC0.31□□□□□ -2.36
SLC6A1P30531 SNORA2B-201ENST00000384583 137 ntBASIC0.31□□□□□ -2.36
SLC6A1P30531 Y_RNA.573-201ENST00000384763 105 ntBASIC0.31□□□□□ -2.36
SLC6A1P30531 SNORD28B-201ENST00000390993 75 ntBASIC0.31□□□□□ -2.36
SLC6A1P30531 SNRPGP10-201ENST00000432323 225 ntBASIC0.31□□□□□ -2.36
SLC6A1P30531 HMGN2P32-201ENST00000444648 269 ntBASIC0.31□□□□□ -2.36
SLC6A1P30531 RNU6-1012P-201ENST00000516606 109 ntBASIC0.31□□□□□ -2.36
SLC6A1P30531 AC093027.1-201ENST00000546698 429 ntBASIC0.31□□□□□ -2.36
SLC6A1P30531 AC060780.3-201ENST00000589464 80 ntBASIC0.31□□□□□ -2.36
SLC6A1P30531 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.31□□□□□ -2.36
SLC6A1P30531 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.3□□□□□ -2.36
SLC6A1P30531 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
SLC6A1P30531 Y_RNA.339-201ENST00000365325 102 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 RNU6-926P-201ENST00000384075 107 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 RNU6-131P-201ENST00000391144 107 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 RNU2-54P-201ENST00000410299 190 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 RNU6-613P-201ENST00000410412 108 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 RNU6-1199P-201ENST00000411249 104 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.3□□□□□ -2.36
SLC6A1P30531 RPL17P19-201ENST00000489069 552 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 AC105313.1-201ENST00000509121 353 ntBASIC0.3□□□□□ -2.36
SLC6A1P30531 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms