Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AL929325.1-201ENST00000603096 117 ntBASIC2.39□□□□□ -2.03
LMO1P25800 RPL12P50-201ENST00000603116 116 ntBASIC2.39□□□□□ -2.03
LMO1P25800 SNORD11B-201ENST00000607707 90 ntBASIC2.39□□□□□ -2.03
LMO1P25800 MIR3670-4-201ENST00000612260 65 ntBASIC2.39□□□□□ -2.03
LMO1P25800 PCGEM1.1-201ENST00000613431 131 ntBASIC2.39□□□□□ -2.03
LMO1P25800 AC010297.1-201ENST00000623948 149 ntBASIC2.39□□□□□ -2.03
LMO1P25800 MIR7515-201ENST00000637837 67 ntBASIC2.39□□□□□ -2.03
LMO1P25800 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
LMO1P25800 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LMO1P25800 MIR26A1-201ENST00000362205 77 ntBASIC2.38□□□□□ -2.03
LMO1P25800 RNU4-15P-201ENST00000362613 141 ntBASIC2.38□□□□□ -2.03
LMO1P25800 RNU1-72P-201ENST00000362976 153 ntBASIC2.38□□□□□ -2.03
LMO1P25800 RNU6-301P-201ENST00000384277 107 ntBASIC2.38□□□□□ -2.03
LMO1P25800 Y_RNA.486-201ENST00000384398 107 ntBASIC2.38□□□□□ -2.03
LMO1P25800 RNA5SP496-201ENST00000391240 109 ntBASIC2.38□□□□□ -2.03
LMO1P25800 RNA5SP136-201ENST00000410906 107 ntBASIC2.38□□□□□ -2.03
LMO1P25800 AC027124.2-201ENST00000428249 105 ntBASIC2.38□□□□□ -2.03
LMO1P25800 AL121890.1-201ENST00000435457 205 ntBASIC2.38□□□□□ -2.03
LMO1P25800 AF228730.3-201ENST00000436691 102 ntBASIC2.38□□□□□ -2.03
LMO1P25800 SCGB1D5P-201ENST00000515134 247 ntBASIC2.38□□□□□ -2.03
LMO1P25800 RNU6-63P-201ENST00000516690 95 ntBASIC2.38□□□□□ -2.03
LMO1P25800 RNU6-267P-201ENST00000516714 103 ntBASIC2.38□□□□□ -2.03
LMO1P25800 AC141557.1-201ENST00000540982 400 ntBASIC2.38□□□□□ -2.03
LMO1P25800 MIR3605-201ENST00000583214 100 ntBASIC2.38□□□□□ -2.03
LMO1P25800 AC007229.1-201ENST00000590455 412 ntBASIC2.38□□□□□ -2.03
LMO1P25800 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
LMO1P25800 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
LMO1P25800 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LMO1P25800 AL356292.1-201ENST00000283110 373 ntBASIC2.37□□□□□ -2.03
LMO1P25800 Y_RNA.93-201ENST00000363066 109 ntBASIC2.37□□□□□ -2.03
LMO1P25800 SNORD18B-201ENST00000365659 72 ntBASIC2.37□□□□□ -2.03
LMO1P25800 SNORA18.2-201ENST00000383865 132 ntBASIC2.37□□□□□ -2.03
LMO1P25800 SNORD21-201ENST00000383953 95 ntBASIC2.37□□□□□ -2.03
LMO1P25800 RNU6-1113P-201ENST00000384348 107 ntBASIC2.37□□□□□ -2.03
LMO1P25800 RNU6-1104P-201ENST00000384723 104 ntBASIC2.37□□□□□ -2.03
LMO1P25800 MIR181A2-201ENST00000384863 110 ntBASIC2.37□□□□□ -2.03
LMO1P25800 SNORA79-201ENST00000408376 140 ntBASIC2.37□□□□□ -2.03
LMO1P25800 RNU6-1328P-201ENST00000410938 106 ntBASIC2.37□□□□□ -2.03
LMO1P25800 RNA5SP127-201ENST00000411051 133 ntBASIC2.37□□□□□ -2.03
LMO1P25800 AC245102.2-201ENST00000448956 180 ntBASIC2.37□□□□□ -2.03
LMO1P25800 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.37□□□□□ -2.03
LMO1P25800 RN7SL429P-201ENST00000479090 223 ntBASIC2.37□□□□□ -2.03
LMO1P25800 RN7SL489P-201ENST00000486185 223 ntBASIC2.37□□□□□ -2.03
LMO1P25800 RN7SL327P-201ENST00000488659 223 ntBASIC2.37□□□□□ -2.03
LMO1P25800 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.37□□□□□ -2.03
LMO1P25800 RNU2-13P-201ENST00000515909 113 ntBASIC2.37□□□□□ -2.03
LMO1P25800 SNORA9.3-201ENST00000516383 129 ntBASIC2.37□□□□□ -2.03
LMO1P25800 SCARNA3-201ENST00000517097 143 ntBASIC2.37□□□□□ -2.03
LMO1P25800 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.37□□□□□ -2.03
LMO1P25800 AC022254.1-201ENST00000567857 235 ntBASIC2.37□□□□□ -2.03
LMO1P25800 AL137067.1-201ENST00000615933 120 ntBASIC2.37□□□□□ -2.03
LMO1P25800 RN7SL853P-201ENST00000617250 223 ntBASIC2.37□□□□□ -2.03
LMO1P25800 AL161431.1-201ENST00000618966 4205 ntBASIC2.37□□□□□ -2.03
LMO1P25800 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.37□□□□□ -2.03
LMO1P25800 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
LMO1P25800 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LMO1P25800 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LMO1P25800 Y_RNA.49-201ENST00000362714 112 ntBASIC2.36□□□□□ -2.03
LMO1P25800 RNU4-41P-201ENST00000364426 143 ntBASIC2.36□□□□□ -2.03
LMO1P25800 RNU6-219P-201ENST00000364728 107 ntBASIC2.36□□□□□ -2.03
LMO1P25800 MIR518C-201ENST00000384822 101 ntBASIC2.36□□□□□ -2.03
LMO1P25800 MIR562-201ENST00000384894 95 ntBASIC2.36□□□□□ -2.03
LMO1P25800 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.36□□□□□ -2.03
LMO1P25800 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.36□□□□□ -2.03
LMO1P25800 AC080013.2-201ENST00000460866 323 ntBASIC2.36□□□□□ -2.03
LMO1P25800 RPL23AP54-201ENST00000495129 419 ntBASIC2.36□□□□□ -2.03
LMO1P25800 MIR5588-201ENST00000581890 63 ntBASIC2.36□□□□□ -2.03
LMO1P25800 AC005562.2-201ENST00000618264 111 ntBASIC2.36□□□□□ -2.03
LMO1P25800 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
LMO1P25800 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.36□□□□□ -2.03
LMO1P25800 AL589743.1-201ENST00000551932 2712 ntBASIC2.35□□□□□ -2.03
LMO1P25800 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.35□□□□□ -2.03
LMO1P25800 Y_RNA.198-201ENST00000364013 98 ntBASIC2.35□□□□□ -2.03
LMO1P25800 RNU6-117P-201ENST00000365415 107 ntBASIC2.35□□□□□ -2.03
LMO1P25800 MIR548A2-201ENST00000384956 97 ntBASIC2.35□□□□□ -2.03
LMO1P25800 MIR592-201ENST00000384959 97 ntBASIC2.35□□□□□ -2.03
LMO1P25800 RNU7-171P-201ENST00000459581 62 ntBASIC2.35□□□□□ -2.03
LMO1P25800 AC003982.1-202ENST00000469928 248 ntBASIC2.35□□□□□ -2.03
LMO1P25800 RPL36AP21-201ENST00000490372 323 ntBASIC2.35□□□□□ -2.03
LMO1P25800 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.35□□□□□ -2.03
LMO1P25800 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.35□□□□□ -2.03
LMO1P25800 EIF4A1P12-201ENST00000551910 141 ntBASIC2.35□□□□□ -2.03
LMO1P25800 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.35□□□□□ -2.03
LMO1P25800 MIR3129-201ENST00000581095 76 ntBASIC2.35□□□□□ -2.03
LMO1P25800 uc_338.4-201ENST00000616635 176 ntBASIC2.35□□□□□ -2.03
LMO1P25800 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.35□□□□□ -2.03
LMO1P25800 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
LMO1P25800 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
LMO1P25800 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
LMO1P25800 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
LMO1P25800 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.34□□□□□ -2.03
LMO1P25800 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LMO1P25800 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LMO1P25800 SNORD114-7-201ENST00000362520 77 ntBASIC2.34□□□□□ -2.03
LMO1P25800 SNORA27.1-201ENST00000362604 124 ntBASIC2.34□□□□□ -2.03
LMO1P25800 U3.8-201ENST00000363675 217 ntBASIC2.34□□□□□ -2.03
LMO1P25800 Y_RNA.796-201ENST00000364268 102 ntBASIC2.34□□□□□ -2.03
LMO1P25800 RNU6-776P-201ENST00000364403 104 ntBASIC2.34□□□□□ -2.03
LMO1P25800 RNU1-133P-201ENST00000364867 167 ntBASIC2.34□□□□□ -2.03
LMO1P25800 Y_RNA.799-201ENST00000364992 102 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms