Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.02
XPAP23025 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
XPAP23025 RNU6-1209P-201ENST00000363655 107 ntBASIC2.4□□□□□ -2.03
XPAP23025 RNU4-84P-201ENST00000364200 139 ntBASIC2.4□□□□□ -2.03
XPAP23025 MIR518A2-201ENST00000384966 87 ntBASIC2.4□□□□□ -2.03
XPAP23025 MIR520G-201ENST00000385064 90 ntBASIC2.4□□□□□ -2.03
XPAP23025 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
XPAP23025 Y_RNA.622-201ENST00000411091 108 ntBASIC2.4□□□□□ -2.03
XPAP23025 RN7SKP101-201ENST00000411376 320 ntBASIC2.4□□□□□ -2.03
XPAP23025 HMGN2P3-201ENST00000433603 273 ntBASIC2.4□□□□□ -2.03
XPAP23025 HMGN2P5-201ENST00000436882 273 ntBASIC2.4□□□□□ -2.03
XPAP23025 AL121914.1-201ENST00000450188 156 ntBASIC2.4□□□□□ -2.03
XPAP23025 IGLV3-17-201ENST00000519099 244 ntBASIC2.4□□□□□ -2.03
XPAP23025 AC008555.8-201ENST00000623602 2168 ntBASIC2.39□□□□□ -2.03
XPAP23025 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
XPAP23025 RNA5SP289-201ENST00000362332 137 ntBASIC2.39□□□□□ -2.03
XPAP23025 RNU6-746P-201ENST00000384112 109 ntBASIC2.39□□□□□ -2.03
XPAP23025 RNU6-1228P-201ENST00000391014 107 ntBASIC2.39□□□□□ -2.03
XPAP23025 RNU4-53P-201ENST00000410828 140 ntBASIC2.39□□□□□ -2.03
XPAP23025 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.39□□□□□ -2.03
XPAP23025 MIR5094-201ENST00000578766 85 ntBASIC2.39□□□□□ -2.03
XPAP23025 SNORD53-201ENST00000579969 78 ntBASIC2.39□□□□□ -2.03
XPAP23025 MIR5694-201ENST00000581190 76 ntBASIC2.39□□□□□ -2.03
XPAP23025 AC022217.4-201ENST00000604389 163 ntBASIC2.39□□□□□ -2.03
XPAP23025 MIR6840-201ENST00000611937 71 ntBASIC2.39□□□□□ -2.03
XPAP23025 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
XPAP23025 SNORA25.6-201ENST00000364121 118 ntBASIC2.38□□□□□ -2.03
XPAP23025 SNORD116-18-201ENST00000383961 92 ntBASIC2.38□□□□□ -2.03
XPAP23025 MIR15B-201ENST00000385045 98 ntBASIC2.38□□□□□ -2.03
XPAP23025 RNA5SP109-201ENST00000391010 116 ntBASIC2.38□□□□□ -2.03
XPAP23025 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
XPAP23025 AC018634.1-201ENST00000437554 401 ntBASIC2.38□□□□□ -2.03
XPAP23025 SNRPGP8-201ENST00000454064 226 ntBASIC2.38□□□□□ -2.03
XPAP23025 SNORD11-201ENST00000459124 84 ntBASIC2.38□□□□□ -2.03
XPAP23025 RNU7-200P-201ENST00000516105 62 ntBASIC2.38□□□□□ -2.03
XPAP23025 RNU6-341P-201ENST00000516973 96 ntBASIC2.38□□□□□ -2.03
XPAP23025 AC024995.1-201ENST00000523014 93 ntBASIC2.38□□□□□ -2.03
XPAP23025 MIR4431-201ENST00000579990 94 ntBASIC2.38□□□□□ -2.03
XPAP23025 AC005786.1-201ENST00000588553 154 ntBASIC2.38□□□□□ -2.03
XPAP23025 AC046143.2-201ENST00000609789 160 ntBASIC2.38□□□□□ -2.03
XPAP23025 AL590808.1-201ENST00000618696 141 ntBASIC2.38□□□□□ -2.03
XPAP23025 SNORA1B-201ENST00000362535 133 ntBASIC2.37□□□□□ -2.03
XPAP23025 Y_RNA.357-201ENST00000365487 109 ntBASIC2.37□□□□□ -2.03
XPAP23025 RNU6-301P-201ENST00000384277 107 ntBASIC2.37□□□□□ -2.03
XPAP23025 RNA5SP496-201ENST00000391240 109 ntBASIC2.37□□□□□ -2.03
XPAP23025 RPS27P1-201ENST00000450552 247 ntBASIC2.37□□□□□ -2.03
XPAP23025 RNVU1-2-201ENST00000516326 135 ntBASIC2.37□□□□□ -2.03
XPAP23025 RNA5SP281-201ENST00000516504 135 ntBASIC2.37□□□□□ -2.03
XPAP23025 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
XPAP23025 AC103810.6-201ENST00000606708 136 ntBASIC2.37□□□□□ -2.03
XPAP23025 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
XPAP23025 SNORD45.3-201ENST00000363836 72 ntBASIC2.36□□□□□ -2.03
XPAP23025 Y_RNA.253-201ENST00000364562 112 ntBASIC2.36□□□□□ -2.03
XPAP23025 RNA5SP126-201ENST00000365092 109 ntBASIC2.36□□□□□ -2.03
XPAP23025 SNORA67.4-201ENST00000384688 142 ntBASIC2.36□□□□□ -2.03
XPAP23025 MIR17-201ENST00000385012 84 ntBASIC2.36□□□□□ -2.03
XPAP23025 AL512604.1-201ENST00000404812 257 ntBASIC2.36□□□□□ -2.03
XPAP23025 RNU4-61P-201ENST00000411243 107 ntBASIC2.36□□□□□ -2.03
XPAP23025 AC245047.4-201ENST00000433189 144 ntBASIC2.36□□□□□ -2.03
XPAP23025 Y_RNA.703-201ENST00000516846 111 ntBASIC2.36□□□□□ -2.03
XPAP23025 AC084364.2-201ENST00000546924 395 ntBASIC2.36□□□□□ -2.03
XPAP23025 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.36□□□□□ -2.03
XPAP23025 AC064859.1-201ENST00000624741 174 ntBASIC2.36□□□□□ -2.03
XPAP23025 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
XPAP23025 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
XPAP23025 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
XPAP23025 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
XPAP23025 RNU6-728P-201ENST00000365375 104 ntBASIC2.35□□□□□ -2.03
XPAP23025 MIR515-2-201ENST00000384883 83 ntBASIC2.35□□□□□ -2.03
XPAP23025 MIR515-1-201ENST00000384884 83 ntBASIC2.35□□□□□ -2.03
XPAP23025 Y_RNA.580-201ENST00000391004 95 ntBASIC2.35□□□□□ -2.03
XPAP23025 RNA5SP465-201ENST00000391195 109 ntBASIC2.35□□□□□ -2.03
XPAP23025 AC006461.1-201ENST00000412637 326 ntBASIC2.35□□□□□ -2.03
XPAP23025 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.35□□□□□ -2.03
XPAP23025 NDUFA4P2-201ENST00000489989 244 ntBASIC2.35□□□□□ -2.03
XPAP23025 AC005840.1-201ENST00000498412 377 ntBASIC2.35□□□□□ -2.03
XPAP23025 MIR4287-201ENST00000579398 78 ntBASIC2.35□□□□□ -2.03
XPAP23025 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.35□□□□□ -2.03
XPAP23025 AC067747.1-201ENST00000608026 250 ntBASIC2.35□□□□□ -2.03
XPAP23025 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.35□□□□□ -2.03
XPAP23025 uc_338.4-201ENST00000616635 176 ntBASIC2.35□□□□□ -2.03
XPAP23025 MIR6873-201ENST00000622788 63 ntBASIC2.35□□□□□ -2.03
XPAP23025 MIR3658-201ENST00000636291 56 ntBASIC2.35□□□□□ -2.03
XPAP23025 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
XPAP23025 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
XPAP23025 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
XPAP23025 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
XPAP23025 AC016717.2-201ENST00000609089 5141 ntBASIC2.34□□□□□ -2.03
XPAP23025 SNORA16B-201ENST00000364674 135 ntBASIC2.34□□□□□ -2.03
XPAP23025 RNY3P5-201ENST00000384127 102 ntBASIC2.34□□□□□ -2.03
XPAP23025 SNORA12.1-201ENST00000390873 148 ntBASIC2.34□□□□□ -2.03
XPAP23025 RNU6-239P-201ENST00000390990 99 ntBASIC2.34□□□□□ -2.03
XPAP23025 HMGN1P7-201ENST00000491722 313 ntBASIC2.34□□□□□ -2.03
XPAP23025 RNU7-121P-201ENST00000516604 62 ntBASIC2.34□□□□□ -2.03
XPAP23025 AC091544.4-201ENST00000555268 342 ntBASIC2.34□□□□□ -2.03
XPAP23025 MIR2681-201ENST00000581814 105 ntBASIC2.34□□□□□ -2.03
XPAP23025 AL591926.4-201ENST00000616895 298 ntBASIC2.34□□□□□ -2.03
XPAP23025 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.34□□□□□ -2.04
XPAP23025 ZNF702P-202ENST00000434269 1966 ntBASIC2.34□□□□□ -2.04
XPAP23025 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms