Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AP002004.2-201ENST00000531656 154 ntBASIC0.88□□□□□ -2.27
MRPL3P09001 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
MRPL3P09001 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.88□□□□□ -2.27
MRPL3P09001 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.88□□□□□ -2.27
MRPL3P09001 SNORD3E-202ENST00000627253 216 ntBASIC0.88□□□□□ -2.27
MRPL3P09001 AC134503.1-201ENST00000633048 54 ntBASIC0.88□□□□□ -2.27
MRPL3P09001 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
MRPL3P09001 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
MRPL3P09001 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 RNU6-102P-201ENST00000384485 104 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 MIR548P-201ENST00000408336 84 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 RNU6-121P-201ENST00000410525 99 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.87□□□□□ -2.27
MRPL3P09001 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.87□□□□□ -2.27
MRPL3P09001 AC087343.1-201ENST00000477341 475 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 AL163540.1-201ENST00000485382 386 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 RNU6-1153P-201ENST00000516760 105 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 RNU7-110P-201ENST00000516891 62 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 Y_RNA.715-201ENST00000517082 110 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 AL358944.1-201ENST00000528537 144 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 AC011604.1-201ENST00000545978 196 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 MIR3664-201ENST00000579074 99 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 MIR4300-201ENST00000581016 96 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 AL162424.1-201ENST00000602325 221 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 AC124312.5-201ENST00000604451 268 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 AL591926.4-201ENST00000616895 298 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.87□□□□□ -2.27
MRPL3P09001 AC068647.2-201ENST00000637380 353 ntBASIC0.87□□□□□ -2.27
MRPL3P09001 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
MRPL3P09001 Y_RNA.26-201ENST00000362539 101 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 Y_RNA.128-201ENST00000363391 112 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 RNU4-50P-201ENST00000364361 141 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 MIR526A1-201ENST00000384897 85 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 SNORD41-201ENST00000386967 70 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 RPL23AP36-201ENST00000413895 458 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 BTF3P4-201ENST00000418852 495 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 MTCO2P12-201ENST00000427426 682 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 MTCYBP6-201ENST00000441810 138 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 HSPE1P25-201ENST00000455484 251 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 RPL39P38-201ENST00000467018 153 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 RNU6-897P-201ENST00000517135 105 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 MIR3171-201ENST00000584270 74 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 SNORA28-201ENST00000606769 126 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 AC011373.1-201ENST00000607270 237 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 AL353997.5-201ENST00000618886 171 ntBASIC0.86□□□□□ -2.27
MRPL3P09001 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.86□□□□□ -2.27
MRPL3P09001 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
MRPL3P09001 RNA5SP99-201ENST00000364020 114 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 RNU4-76P-201ENST00000364509 141 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 RNU6-806P-201ENST00000365147 105 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 Y_RNA.368-201ENST00000365547 113 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 Y_RNA.418-201ENST00000384029 102 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 Y_RNA.424-201ENST00000384063 103 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 MIR222-201ENST00000384992 110 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 MIR653-201ENST00000385279 96 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
MRPL3P09001 RNA5SP482-201ENST00000391269 118 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 RNU6-855P-201ENST00000410395 104 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 RNU2-14P-201ENST00000411053 191 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 HMGN1P10-201ENST00000474557 553 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 AC098869.1-201ENST00000481627 292 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 RNU7-12P-201ENST00000516030 62 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 RNU6-922P-201ENST00000516753 99 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 RNU7-28P-201ENST00000516759 62 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 Y_RNA.701-201ENST00000516812 110 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 AC022616.4-201ENST00000522985 181 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 AC005972.2-201ENST00000604690 348 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 BX284668.6-201ENST00000606899 438 ntBASIC0.85□□□□□ -2.27
MRPL3P09001 AC068700.1-201ENST00000565862 3754 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 RNU6-199P-201ENST00000362954 107 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 RNU4-80P-201ENST00000363200 141 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 Y_RNA.140-201ENST00000363474 103 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 SNORD113-8-201ENST00000363497 74 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 RNU6-1048P-201ENST00000364054 107 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 RNU6-801P-201ENST00000364087 105 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 Y_RNA.222-201ENST00000364264 102 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 Y_RNA.253-201ENST00000364562 112 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 Y_RNA.383-201ENST00000383855 97 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 SNORA25-201ENST00000384384 134 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 Y_RNA.526-201ENST00000384572 110 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 MIR562-201ENST00000384894 95 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 SNORD115-46-201ENST00000390982 71 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 RNU11-5P-201ENST00000391216 129 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 MIR1252-201ENST00000408861 65 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 PIGPP3-201ENST00000425307 415 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 snoU13.23-201ENST00000458863 104 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 RNU6-496P-201ENST00000516145 99 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 RNU6-988P-201ENST00000519081 107 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 MIR4680-201ENST00000580906 66 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 HSPE1P19-201ENST00000603327 295 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.84□□□□□ -2.27
MRPL3P09001 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.84□□□□□ -2.27
MRPL3P09001 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.84□□□□□ -2.28
MRPL3P09001 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.83□□□□□ -2.28
MRPL3P09001 AL391987.6-201ENST00000305671 199 ntBASIC0.83□□□□□ -2.28
MRPL3P09001 SNORD68-201ENST00000363214 84 ntBASIC0.83□□□□□ -2.28
MRPL3P09001 Y_RNA.153-201ENST00000363615 91 ntBASIC0.83□□□□□ -2.28
MRPL3P09001 Y_RNA.183-201ENST00000363882 113 ntBASIC0.83□□□□□ -2.28
MRPL3P09001 Y_RNA.214-201ENST00000364201 112 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms