Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RPS4XP11-201ENST00000446897 772 ntBASIC2.25□□□□□ -2.05
RHOP08100 RNU7-200P-201ENST00000516105 62 ntBASIC2.25□□□□□ -2.05
RHOP08100 RNU7-99P-201ENST00000516271 62 ntBASIC2.25□□□□□ -2.05
RHOP08100 AC109810.1-201ENST00000534066 224 ntBASIC2.25□□□□□ -2.05
RHOP08100 AC026271.5-201ENST00000577873 130 ntBASIC2.25□□□□□ -2.05
RHOP08100 MIR3133-201ENST00000583157 78 ntBASIC2.25□□□□□ -2.05
RHOP08100 AL021707.8-201ENST00000609428 183 ntBASIC2.25□□□□□ -2.05
RHOP08100 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
RHOP08100 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RHOP08100 RNA5SP99-201ENST00000364020 114 ntBASIC2.24□□□□□ -2.05
RHOP08100 RNY3P5-201ENST00000384127 102 ntBASIC2.24□□□□□ -2.05
RHOP08100 RNU1-148P-201ENST00000384472 162 ntBASIC2.24□□□□□ -2.05
RHOP08100 RNU6-417P-201ENST00000384712 107 ntBASIC2.24□□□□□ -2.05
RHOP08100 RNU6-376P-201ENST00000384731 106 ntBASIC2.24□□□□□ -2.05
RHOP08100 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
RHOP08100 MIR520G-201ENST00000385064 90 ntBASIC2.24□□□□□ -2.05
RHOP08100 RNU6-1228P-201ENST00000391014 107 ntBASIC2.24□□□□□ -2.05
RHOP08100 RNA5SP496-201ENST00000391240 109 ntBASIC2.24□□□□□ -2.05
RHOP08100 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.24□□□□□ -2.05
RHOP08100 RNA5SP270-201ENST00000411361 118 ntBASIC2.24□□□□□ -2.05
RHOP08100 SEPT7P4-201ENST00000437076 306 ntBASIC2.24□□□□□ -2.05
RHOP08100 ATP5J2P3-201ENST00000451550 258 ntBASIC2.24□□□□□ -2.05
RHOP08100 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.24□□□□□ -2.05
RHOP08100 RPL23AP42-201ENST00000471152 471 ntBASIC2.24□□□□□ -2.05
RHOP08100 RNU6-406P-201ENST00000516470 107 ntBASIC2.24□□□□□ -2.05
RHOP08100 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
RHOP08100 RNU6-453P-201ENST00000516819 85 ntBASIC2.24□□□□□ -2.05
RHOP08100 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.24□□□□□ -2.05
RHOP08100 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.24□□□□□ -2.05
RHOP08100 MIR4431-201ENST00000579990 94 ntBASIC2.24□□□□□ -2.05
RHOP08100 AL137847.3-201ENST00000611521 109 ntBASIC2.24□□□□□ -2.05
RHOP08100 AL359075.3-201ENST00000613288 217 ntBASIC2.24□□□□□ -2.05
RHOP08100 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RHOP08100 AC100821.1-201ENST00000523153 2479 ntBASIC2.23□□□□□ -2.05
RHOP08100 RNU6-774P-201ENST00000363238 107 ntBASIC2.23□□□□□ -2.05
RHOP08100 RNU6-1164P-201ENST00000364428 107 ntBASIC2.23□□□□□ -2.05
RHOP08100 MIR29C-201ENST00000385231 88 ntBASIC2.23□□□□□ -2.05
RHOP08100 RNU6-383P-201ENST00000410864 94 ntBASIC2.23□□□□□ -2.05
RHOP08100 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.23□□□□□ -2.05
RHOP08100 CST2P1-201ENST00000425770 87 ntBASIC2.23□□□□□ -2.05
RHOP08100 AL445646.1-201ENST00000431784 216 ntBASIC2.23□□□□□ -2.05
RHOP08100 AC245047.8-201ENST00000456455 284 ntBASIC2.23□□□□□ -2.05
RHOP08100 RPS26P45-201ENST00000471748 340 ntBASIC2.23□□□□□ -2.05
RHOP08100 RNU6-1041P-201ENST00000516254 102 ntBASIC2.23□□□□□ -2.05
RHOP08100 RNU6-1007P-201ENST00000516586 107 ntBASIC2.23□□□□□ -2.05
RHOP08100 MTND5P41-201ENST00000517498 206 ntBASIC2.23□□□□□ -2.05
RHOP08100 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.23□□□□□ -2.05
RHOP08100 MIR3169-201ENST00000578032 83 ntBASIC2.23□□□□□ -2.05
RHOP08100 AC104465.1-201ENST00000611365 139 ntBASIC2.23□□□□□ -2.05
RHOP08100 AC012640.5-201ENST00000623897 319 ntBASIC2.23□□□□□ -2.05
RHOP08100 MTND1P7-201ENST00000632801 297 ntBASIC2.23□□□□□ -2.05
RHOP08100 U6.108-201ENST00000637764 58 ntBASIC2.23□□□□□ -2.05
RHOP08100 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RHOP08100 SNORA3A-201ENST00000364113 130 ntBASIC2.22□□□□□ -2.05
RHOP08100 RNA5SP493-201ENST00000364115 91 ntBASIC2.22□□□□□ -2.05
RHOP08100 Y_RNA.398-201ENST00000383952 99 ntBASIC2.22□□□□□ -2.05
RHOP08100 SNORA80E-201ENST00000384744 137 ntBASIC2.22□□□□□ -2.05
RHOP08100 SNORA48.3-201ENST00000391081 134 ntBASIC2.22□□□□□ -2.05
RHOP08100 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.22□□□□□ -2.05
RHOP08100 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.22□□□□□ -2.05
RHOP08100 RNU7-121P-201ENST00000516604 62 ntBASIC2.22□□□□□ -2.05
RHOP08100 AC024995.1-201ENST00000523014 93 ntBASIC2.22□□□□□ -2.05
RHOP08100 AC091178.2-201ENST00000584401 117 ntBASIC2.22□□□□□ -2.05
RHOP08100 AC073413.2-201ENST00000604332 360 ntBASIC2.22□□□□□ -2.05
RHOP08100 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RHOP08100 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RHOP08100 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
RHOP08100 Y_RNA.357-201ENST00000365487 109 ntBASIC2.21□□□□□ -2.06
RHOP08100 RNU6-239P-201ENST00000390990 99 ntBASIC2.21□□□□□ -2.06
RHOP08100 AL512604.1-201ENST00000404812 257 ntBASIC2.21□□□□□ -2.06
RHOP08100 AL606845.1-201ENST00000404881 255 ntBASIC2.21□□□□□ -2.06
RHOP08100 RNU4-43P-201ENST00000410628 137 ntBASIC2.21□□□□□ -2.06
RHOP08100 HMGN2P23-201ENST00000456759 269 ntBASIC2.21□□□□□ -2.06
RHOP08100 RNA5SP137-201ENST00000516833 135 ntBASIC2.21□□□□□ -2.06
RHOP08100 AC011604.1-201ENST00000545978 196 ntBASIC2.21□□□□□ -2.06
RHOP08100 AL929325.1-201ENST00000603096 117 ntBASIC2.21□□□□□ -2.06
RHOP08100 Y_RNA.203-201ENST00000364106 102 ntBASIC2.2□□□□□ -2.06
RHOP08100 RNU6-187P-201ENST00000384139 106 ntBASIC2.2□□□□□ -2.06
RHOP08100 MT-TT-201ENST00000387460 66 ntBASIC2.2□□□□□ -2.06
RHOP08100 RNU6-1186P-201ENST00000410429 97 ntBASIC2.2□□□□□ -2.06
RHOP08100 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.2□□□□□ -2.06
RHOP08100 AC107027.2-201ENST00000512197 115 ntBASIC2.2□□□□□ -2.06
RHOP08100 RNU6-548P-201ENST00000517083 115 ntBASIC2.2□□□□□ -2.06
RHOP08100 RNU6-1096P-201ENST00000517089 102 ntBASIC2.2□□□□□ -2.06
RHOP08100 RNU6-789P-201ENST00000517105 102 ntBASIC2.2□□□□□ -2.06
RHOP08100 MIR2681-201ENST00000581814 105 ntBASIC2.2□□□□□ -2.06
RHOP08100 MIR6895-201ENST00000613497 78 ntBASIC2.2□□□□□ -2.06
RHOP08100 AL353997.5-201ENST00000618886 171 ntBASIC2.2□□□□□ -2.06
RHOP08100 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
RHOP08100 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RHOP08100 AC018630.2-201ENST00000534866 2403 ntBASIC2.19□□□□□ -2.06
RHOP08100 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
RHOP08100 RNU6-23P-201ENST00000363283 107 ntBASIC2.19□□□□□ -2.06
RHOP08100 RNU4-41P-201ENST00000364426 143 ntBASIC2.19□□□□□ -2.06
RHOP08100 RNU6-1130P-201ENST00000365434 107 ntBASIC2.19□□□□□ -2.06
RHOP08100 SNORD50.2-201ENST00000365465 70 ntBASIC2.19□□□□□ -2.06
RHOP08100 RNU6-449P-201ENST00000383914 107 ntBASIC2.19□□□□□ -2.06
RHOP08100 SNORD116-18-201ENST00000383961 92 ntBASIC2.19□□□□□ -2.06
RHOP08100 RNU6-136P-201ENST00000384663 107 ntBASIC2.19□□□□□ -2.06
RHOP08100 U8.13-201ENST00000390842 128 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms