Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ZBED1O96006 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ZBED1O96006 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
ZBED1O96006 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.01□□□□□ -2.09
ZBED1O96006 RNU6-1205P-201ENST00000363625 106 ntBASIC2.01□□□□□ -2.09
ZBED1O96006 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
ZBED1O96006 MIR548H3-201ENST00000408771 118 ntBASIC2.01□□□□□ -2.09
ZBED1O96006 SNORA36B-201ENST00000410438 131 ntBASIC2.01□□□□□ -2.09
ZBED1O96006 SNORD127-201ENST00000458892 86 ntBASIC2.01□□□□□ -2.09
ZBED1O96006 RN7SL274P-201ENST00000492268 272 ntBASIC2.01□□□□□ -2.09
ZBED1O96006 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.01□□□□□ -2.09
ZBED1O96006 MIR4503-201ENST00000582187 83 ntBASIC2.01□□□□□ -2.09
ZBED1O96006 MIR3149-201ENST00000584629 83 ntBASIC2.01□□□□□ -2.09
ZBED1O96006 AC073349.3-201ENST00000617616 186 ntBASIC2.01□□□□□ -2.09
ZBED1O96006 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
ZBED1O96006 Y_RNA.54-201ENST00000362766 105 ntBASIC2□□□□□ -2.09
ZBED1O96006 SNORD68-201ENST00000363214 84 ntBASIC2□□□□□ -2.09
ZBED1O96006 Y_RNA.217-201ENST00000364214 105 ntBASIC2□□□□□ -2.09
ZBED1O96006 Y_RNA.352-201ENST00000365439 102 ntBASIC2□□□□□ -2.09
ZBED1O96006 Y_RNA.452-201ENST00000384202 108 ntBASIC2□□□□□ -2.09
ZBED1O96006 RNU6-1289P-201ENST00000384431 106 ntBASIC2□□□□□ -2.09
ZBED1O96006 Y_RNA.518-201ENST00000384552 113 ntBASIC2□□□□□ -2.09
ZBED1O96006 MIR1289-2-201ENST00000408360 111 ntBASIC2□□□□□ -2.09
ZBED1O96006 HMGN2P23-201ENST00000456759 269 ntBASIC2□□□□□ -2.09
ZBED1O96006 snoU13.9-201ENST00000458927 103 ntBASIC2□□□□□ -2.09
ZBED1O96006 RNU6-1132P-201ENST00000459214 107 ntBASIC2□□□□□ -2.09
ZBED1O96006 Y_RNA.641-201ENST00000459414 105 ntBASIC2□□□□□ -2.09
ZBED1O96006 RPL39P38-201ENST00000467018 153 ntBASIC2□□□□□ -2.09
ZBED1O96006 RNA5SP182-201ENST00000516064 82 ntBASIC2□□□□□ -2.09
ZBED1O96006 Y_RNA.714-201ENST00000517065 90 ntBASIC2□□□□□ -2.09
ZBED1O96006 AC110588.1-201ENST00000559699 137 ntBASIC2□□□□□ -2.09
ZBED1O96006 MIR3198-2-201ENST00000577868 80 ntBASIC2□□□□□ -2.09
ZBED1O96006 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2□□□□□ -2.09
ZBED1O96006 AC012433.1-201ENST00000588916 398 ntBASIC2□□□□□ -2.09
ZBED1O96006 AC013791.1-201ENST00000616619 62 ntBASIC2□□□□□ -2.09
ZBED1O96006 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
ZBED1O96006 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
ZBED1O96006 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
ZBED1O96006 Y_RNA.14-201ENST00000362415 103 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 RNU4-41P-201ENST00000364426 143 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 RNU6-144P-201ENST00000383951 107 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 U8.13-201ENST00000390842 128 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 RPL30P13-201ENST00000418873 348 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 AL445685.2-201ENST00000422551 342 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 RNU6-437P-201ENST00000459408 95 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 Y_RNA.679-201ENST00000516416 91 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 MIR2681-201ENST00000581814 105 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 AC005357.1-201ENST00000588399 301 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 AC062037.2-201ENST00000610137 73 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 JPX_2.1-201ENST00000614161 69 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 snoU18.1-201ENST00000629629 71 ntBASIC1.99□□□□□ -2.09
ZBED1O96006 MIR126-201ENST00000362291 85 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 RNU6-1123P-201ENST00000362347 106 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 Y_RNA.193-201ENST00000363979 102 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 Y_RNA.203-201ENST00000364106 102 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 Y_RNA.293-201ENST00000364908 93 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 RNU6-203P-201ENST00000384038 104 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 Y_RNA.590-201ENST00000410140 107 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 MLLT10P1-201ENST00000418346 262 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 PGBD4P5-201ENST00000445958 426 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 Y_RNA.637-201ENST00000459424 114 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 HMGN1P7-201ENST00000491722 313 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 OR9P1P-201ENST00000496431 281 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 Y_RNA.668-201ENST00000516233 93 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.98□□□□□ -2.09
ZBED1O96006 MIR5692C2-201ENST00000577959 77 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 AL591926.4-201ENST00000616895 298 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 AL513423.1-201ENST00000621695 132 ntBASIC1.98□□□□□ -2.09
ZBED1O96006 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ZBED1O96006 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ZBED1O96006 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ZBED1O96006 Y_RNA.117-201ENST00000363294 101 ntBASIC1.97□□□□□ -2.09
ZBED1O96006 Y_RNA.253-201ENST00000364562 112 ntBASIC1.97□□□□□ -2.09
ZBED1O96006 RNU6-740P-201ENST00000364734 105 ntBASIC1.97□□□□□ -2.09
ZBED1O96006 RNU6-574P-201ENST00000384265 107 ntBASIC1.97□□□□□ -2.09
ZBED1O96006 MIR583-201ENST00000384846 75 ntBASIC1.97□□□□□ -2.09
ZBED1O96006 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.97□□□□□ -2.09
ZBED1O96006 AC099513.1-201ENST00000490423 301 ntBASIC1.97□□□□□ -2.09
ZBED1O96006 AC004817.2-201ENST00000561794 651 ntBASIC1.97□□□□□ -2.09
ZBED1O96006 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.97□□□□□ -2.09
ZBED1O96006 SNORD3E-202ENST00000627253 216 ntBASIC1.97□□□□□ -2.09
ZBED1O96006 ICE2P2-201ENST00000483823 2787 ntBASIC1.96□□□□□ -2.1
ZBED1O96006 MIR424-201ENST00000362227 98 ntBASIC1.96□□□□□ -2.1
ZBED1O96006 AL603910.2-201ENST00000407268 136 ntBASIC1.96□□□□□ -2.1
ZBED1O96006 AC004965.1-201ENST00000413033 213 ntBASIC1.96□□□□□ -2.1
ZBED1O96006 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.96□□□□□ -2.1
ZBED1O96006 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.96□□□□□ -2.1
ZBED1O96006 MIR8063-201ENST00000621930 81 ntBASIC1.96□□□□□ -2.1
ZBED1O96006 MIR367-201ENST00000362299 68 ntBASIC1.95□□□□□ -2.1
ZBED1O96006 Y_RNA.350-201ENST00000365409 98 ntBASIC1.95□□□□□ -2.1
ZBED1O96006 RNU6-211P-201ENST00000384047 107 ntBASIC1.95□□□□□ -2.1
ZBED1O96006 RNU6-131P-201ENST00000391144 107 ntBASIC1.95□□□□□ -2.1
ZBED1O96006 SNORA40.18-201ENST00000391200 128 ntBASIC1.95□□□□□ -2.1
ZBED1O96006 CALM2P4-201ENST00000430810 426 ntBASIC1.95□□□□□ -2.1
ZBED1O96006 SNRPGP10-201ENST00000432323 225 ntBASIC1.95□□□□□ -2.1
ZBED1O96006 AC003989.2-201ENST00000440224 169 ntBASIC1.95□□□□□ -2.1
ZBED1O96006 Z98949.2-201ENST00000440996 144 ntBASIC1.95□□□□□ -2.1
ZBED1O96006 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.95□□□□□ -2.1
ZBED1O96006 AC008834.1-201ENST00000511612 175 ntBASIC1.95□□□□□ -2.1
ZBED1O96006 RNA5SP168-201ENST00000516642 112 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms