Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RNA5SP216-201ENST00000516111 123 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 MTND4P33-201ENST00000556706 766 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 MIR3179-1-201ENST00000578940 84 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 MIR3179-2-201ENST00000579107 84 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 MIR3179-3-201ENST00000579566 84 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 AL133255.1-201ENST00000606374 441 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 RNU6-88P-201ENST00000606801 100 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 MIR3179-4-201ENST00000617599 84 ntBASIC-1.67□□□□□ -2.68
LTN1O94822 RNU6-324P-201ENST00000363957 106 ntBASIC-1.68□□□□□ -2.68
LTN1O94822 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.68□□□□□ -2.68
LTN1O94822 RNU6-609P-201ENST00000365459 107 ntBASIC-1.68□□□□□ -2.68
LTN1O94822 RNU6-926P-201ENST00000384075 107 ntBASIC-1.68□□□□□ -2.68
LTN1O94822 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.68□□□□□ -2.68
LTN1O94822 MTATP6P17-201ENST00000431030 672 ntBASIC-1.68□□□□□ -2.68
LTN1O94822 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.68□□□□□ -2.68
LTN1O94822 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.68□□□□□ -2.68
LTN1O94822 SNORD38.3-201ENST00000516599 73 ntBASIC-1.68□□□□□ -2.68
LTN1O94822 AC068587.4-201ENST00000533893 186 ntBASIC-1.68□□□□□ -2.68
LTN1O94822 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.69□□□□□ -2.68
LTN1O94822 SNORA1.2-201ENST00000365189 134 ntBASIC-1.69□□□□□ -2.68
LTN1O94822 AC137499.1-201ENST00000427602 88 ntBASIC-1.69□□□□□ -2.68
LTN1O94822 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.69□□□□□ -2.68
LTN1O94822 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.69□□□□□ -2.68
LTN1O94822 AC140658.3-201ENST00000567603 271 ntBASIC-1.69□□□□□ -2.68
LTN1O94822 AC011458.1-201ENST00000604034 617 ntBASIC-1.69□□□□□ -2.68
LTN1O94822 AC139792.3-201ENST00000623525 224 ntBASIC-1.69□□□□□ -2.68
LTN1O94822 MIR1246-201ENST00000636535 73 ntBASIC-1.69□□□□□ -2.68
LTN1O94822 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 RNU6-827P-201ENST00000365553 106 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 RNU4-83P-201ENST00000410863 133 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 AC108729.2-201ENST00000476543 840 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 SNORA25.14-201ENST00000516481 132 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 RNU7-181P-201ENST00000517234 74 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 AC005776.1-201ENST00000603164 290 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 MIR6851-201ENST00000617060 67 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 RNU6-136P-201ENST00000384663 107 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 MTCYBP4-201ENST00000401524 249 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.7□□□□□ -2.68
LTN1O94822 RPL39P25-201ENST00000449384 154 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 MTCO2P6-201ENST00000463134 685 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 GMFBP1-201ENST00000467831 427 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.7□□□□□ -2.68
LTN1O94822 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.7□□□□□ -2.68
LTN1O94822 RNU2-13P-201ENST00000515909 113 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 RNU7-188P-201ENST00000517063 64 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 HIF1AP1-201ENST00000553642 175 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.7□□□□□ -2.68
LTN1O94822 MTND4LP25-201ENST00000570218 163 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 MIR4491-201ENST00000581087 68 ntBASIC-1.7□□□□□ -2.68
LTN1O94822 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.7□□□□□ -2.68
LTN1O94822 RNU6-403P-201ENST00000363163 104 ntBASIC-1.71□□□□□ -2.68
LTN1O94822 SNORD115-44-201ENST00000365391 82 ntBASIC-1.71□□□□□ -2.68
LTN1O94822 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.71□□□□□ -2.68
LTN1O94822 MTCO2P11-201ENST00000431069 680 ntBASIC-1.71□□□□□ -2.68
LTN1O94822 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.71□□□□□ -2.68
LTN1O94822 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.71□□□□□ -2.68
LTN1O94822 MIR6082-201ENST00000613604 109 ntBASIC-1.71□□□□□ -2.68
LTN1O94822 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.72□□□□□ -2.68
LTN1O94822 MIR522-201ENST00000385071 87 ntBASIC-1.72□□□□□ -2.68
LTN1O94822 USP9YP12-201ENST00000450481 570 ntBASIC-1.72□□□□□ -2.68
LTN1O94822 AL500527.2-201ENST00000454105 95 ntBASIC-1.72□□□□□ -2.68
LTN1O94822 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.72□□□□□ -2.68
LTN1O94822 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.72□□□□□ -2.68
LTN1O94822 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.72□□□□□ -2.68
LTN1O94822 AC091965.4-201ENST00000607691 587 ntBASIC-1.72□□□□□ -2.68
LTN1O94822 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.72□□□□□ -2.68
LTN1O94822 MIR9-2-201ENST00000384838 87 ntBASIC-1.72□□□□□ -2.69
LTN1O94822 SCARNA18B-201ENST00000458806 135 ntBASIC-1.72□□□□□ -2.69
LTN1O94822 AC010655.3-201ENST00000478818 450 ntBASIC-1.72□□□□□ -2.69
LTN1O94822 SNORA25.13-201ENST00000516395 103 ntBASIC-1.72□□□□□ -2.69
LTN1O94822 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.72□□□□□ -2.69
LTN1O94822 AL356055.1-201ENST00000602528 446 ntBASIC-1.72□□□□□ -2.69
LTN1O94822 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.73□□□□□ -2.69
LTN1O94822 RNU6-462P-201ENST00000362659 105 ntBASIC-1.73□□□□□ -2.69
LTN1O94822 MIR181B2-201ENST00000385004 89 ntBASIC-1.73□□□□□ -2.69
LTN1O94822 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.73□□□□□ -2.69
LTN1O94822 AC073648.5-201ENST00000603502 305 ntBASIC-1.73□□□□□ -2.69
LTN1O94822 AC126544.2-201ENST00000625174 749 ntBASIC-1.73□□□□□ -2.69
LTN1O94822 SNORA24.1-201ENST00000384401 135 ntBASIC-1.74□□□□□ -2.69
LTN1O94822 SNORD56B-201ENST00000384713 71 ntBASIC-1.74□□□□□ -2.69
LTN1O94822 RNU6-131P-201ENST00000391144 107 ntBASIC-1.74□□□□□ -2.69
LTN1O94822 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.74□□□□□ -2.69
LTN1O94822 AC123904.2-201ENST00000548059 300 ntBASIC-1.74□□□□□ -2.69
LTN1O94822 RNU6-86P-201ENST00000606534 107 ntBASIC-1.74□□□□□ -2.69
LTN1O94822 AC009159.2-201ENST00000617603 606 ntBASIC-1.74□□□□□ -2.69
LTN1O94822 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 SNORA20B-201ENST00000384220 132 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 AC074085.1-201ENST00000413598 418 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 AC079140.5-201ENST00000507882 310 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 AL121757.2-201ENST00000611223 313 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 MIR8066-201ENST00000617280 78 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 RNU6-560P-201ENST00000364007 108 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 RNU6-1286P-201ENST00000383871 107 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 RNU6-541P-201ENST00000384709 110 ntBASIC-1.75□□□□□ -2.69
LTN1O94822 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.75□□□□□ -2.69
LTN1O94822 AL117351.1-201ENST00000438864 766 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms