Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 RNU6-307P-201ENST00000516743 106 ntBASIC0.44□□□□□ -2.34
CLDN11O75508 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.44□□□□□ -2.34
CLDN11O75508 AC018638.8-201ENST00000588755 281 ntBASIC0.44□□□□□ -2.34
CLDN11O75508 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
CLDN11O75508 RNU6-94P-201ENST00000607728 107 ntBASIC0.44□□□□□ -2.34
CLDN11O75508 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.44□□□□□ -2.34
CLDN11O75508 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.43□□□□□ -2.34
CLDN11O75508 SNORD113.3-201ENST00000364630 78 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 Y_RNA.482-201ENST00000384377 111 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 RNU6-601P-201ENST00000384540 107 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 AL031003.1-201ENST00000404229 172 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 MIR548F5-201ENST00000408421 86 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 MIR2053-201ENST00000459295 91 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 RPL7P42-201ENST00000481005 679 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.43□□□□□ -2.34
CLDN11O75508 SNORA25.10-201ENST00000515926 124 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 Y_RNA.714-201ENST00000517065 90 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 AF235103.2-201ENST00000525753 346 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 PISRT1.1-201ENST00000616930 107 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 PVT1_3.1-201ENST00000620853 95 ntBASIC0.43□□□□□ -2.34
CLDN11O75508 RNU6-961P-201ENST00000363893 105 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 RNU6-131P-201ENST00000391144 107 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 MTND1P4-201ENST00000435196 415 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 AL392103.1-201ENST00000447000 198 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 AC107399.1-201ENST00000451226 265 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 AC093027.1-201ENST00000546698 429 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 EIF1P4-201ENST00000572664 335 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 AC011195.1-201ENST00000578177 177 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 MIR1244-1-201ENST00000612829 85 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.42□□□□□ -2.34
CLDN11O75508 MIR1244-3-201ENST00000635744 85 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 MIR1244-2-201ENST00000636449 85 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 MIR1244-4-202ENST00000636813 85 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 MIR3688-2-201ENST00000636963 87 ntBASIC0.42□□□□□ -2.34
CLDN11O75508 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CLDN11O75508 RNU2-54P-201ENST00000410299 190 ntBASIC0.41□□□□□ -2.34
CLDN11O75508 RNU2-61P-201ENST00000411069 191 ntBASIC0.41□□□□□ -2.34
CLDN11O75508 RNU6-1304P-201ENST00000411374 106 ntBASIC0.41□□□□□ -2.34
CLDN11O75508 AC244098.3-201ENST00000424803 96 ntBASIC0.41□□□□□ -2.34
CLDN11O75508 MTND4P28-201ENST00000426217 387 ntBASIC0.41□□□□□ -2.34
CLDN11O75508 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.41□□□□□ -2.34
CLDN11O75508 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.41□□□□□ -2.34
CLDN11O75508 MTND3P10-201ENST00000450967 341 ntBASIC0.41□□□□□ -2.34
CLDN11O75508 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.41□□□□□ -2.34
CLDN11O75508 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.41□□□□□ -2.34
CLDN11O75508 AC005972.2-201ENST00000604690 348 ntBASIC0.41□□□□□ -2.34
CLDN11O75508 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
CLDN11O75508 AL589743.1-201ENST00000551932 2712 ntBASIC0.41□□□□□ -2.34
CLDN11O75508 AC134026.1-201ENST00000623249 2239 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 SNORD50B-201ENST00000364995 70 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 Y_RNA.404-201ENST00000383978 102 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 Y_RNA.436-201ENST00000384097 102 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 SNORA50A-201ENST00000384225 134 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 MIR1827-201ENST00000408549 66 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 MTND3P8-201ENST00000412909 339 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 AC116353.2-201ENST00000505332 712 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 RNU6-720P-201ENST00000516363 108 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 AC055872.1-201ENST00000570978 278 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 AC240442.1-201ENST00000616055 283 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.4□□□□□ -2.35
CLDN11O75508 MIR4251-201ENST00000635819 61 ntBASIC0.4□□□□□ -2.35
CLDN11O75508 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
CLDN11O75508 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
CLDN11O75508 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
CLDN11O75508 MIR1-1-201ENST00000362147 71 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 Y_RNA.101-201ENST00000363154 102 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 Y_RNA.339-201ENST00000365325 102 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 SNORA72-201ENST00000384339 132 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 RNU6-342P-201ENST00000384521 104 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 SNORD105-201ENST00000386910 85 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 SNORA69.1-201ENST00000390904 137 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 SNORD115-47-201ENST00000391226 86 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 RNA5SP222-201ENST00000411039 105 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 SNRPGP10-201ENST00000432323 225 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.39□□□□□ -2.35
CLDN11O75508 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.39□□□□□ -2.35
CLDN11O75508 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.39□□□□□ -2.35
CLDN11O75508 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.39□□□□□ -2.35
CLDN11O75508 MIR4300-201ENST00000581016 96 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 AC008133.2-201ENST00000624540 351 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 MIR6516-201ENST00000630554 81 ntBASIC0.39□□□□□ -2.35
CLDN11O75508 Y_RNA.86-201ENST00000363020 111 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 RNU6-623P-201ENST00000363143 105 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 Y_RNA.172-201ENST00000363765 102 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 RNU6-324P-201ENST00000363957 106 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 RNU6-99P-201ENST00000364721 107 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 Y_RNA.368-201ENST00000365547 113 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 RNU6-926P-201ENST00000384075 107 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 SNORA2B-201ENST00000384583 137 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 MIR1302-7-201ENST00000408841 72 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 AC005534.2-201ENST00000431047 433 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.38□□□□□ -2.35
CLDN11O75508 FCF1P4-201ENST00000448326 183 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 CHEK2P4-201ENST00000450340 246 ntBASIC0.38□□□□□ -2.35
CLDN11O75508 AC092989.1-201ENST00000481235 277 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms